RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 SPATA21Q7Z572 469 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 TMEM120BA0PK00 339 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 NR3C1P04150 777 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 KRT5P13647 590 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 SGO2Q562F6 1265 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.12■□□□□ 0.332e-8■■■■□ 20.4
SLC6A8-201ENST00000253122 ZBTB21Q9ULJ3 1066 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 USTQ9Y2C2 406 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 NUP98P52948 1817 aa17.12■□□□□ 0.33
SLC6A8-201ENST00000253122 AGTP01019 485 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 HGSNATQ68CP4 663 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 SLC17A8Q8NDX2 589 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 RFFLQ8WZ73 363 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 VPS37BQ9H9H4 285 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 C15orf41Q9Y2V0 281 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 IL9RQ01113 521 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 SEPT2Q15019 361 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 KNOP1Q1ED39 458 aaKnown RBP17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 PIK3R5Q8WYR1 880 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 GGA2Q9UJY4 613 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 ARHGEF18Q6ZSZ5 1173 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 PPM1KQ8N3J5 372 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 C18orf8Q96DM3 657 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 INTUQ9ULD6 942 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 PCDHA1Q9Y5I3 950 aa17.11■□□□□ 0.33
SLC6A8-201ENST00000253122 PODXLO00592 558 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 TRIM49P0CI25 452 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 TRIM49CP0CI26 452 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 CCND1P24385 295 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 RASSF2P50749 326 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 CLUL1Q15846 466 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 RCSD1Q6JBY9 416 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 LRRC55Q6ZSA7 311 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 PNMA5Q96PV4 448 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 UBE2TQ9NPD8 197 aaPredicted RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 IL17RBQ9NRM6 502 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 ATXN2Q99700 1313 aaKnown RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 ALDH5A1P51649 535 aaPredicted RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 SUCLA2Q9P2R7 463 aaPredicted RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 ARL2BPQ9Y2Y0 163 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 FAM187AA6NFU0 413 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 RGL2O15211 777 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 ATF2P15336 505 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 ERFP50548 548 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 HP1BP3Q5SSJ5 553 aaPredicted RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 TAB3Q8N5C8 712 aaPredicted RBP17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 C1orf54Q8WWF1 131 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 NUDCD1Q96RS6 583 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 TXLNGQ9NUQ3 528 aa17.1■□□□□ 0.33
SLC6A8-201ENST00000253122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.332e-11■■□□□ 11.6
SLC6A8-201ENST00000253122 ADRA2BP18089 450 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 MSH2P43246 934 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 ERMARDQ5T6L9 678 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 LONP2Q86WA8 852 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 LRRC8CQ8TDW0 803 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 PIGOQ8TEQ8 1089 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 GHRP10912 638 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 COPS2P61201 443 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 SPRED3Q2MJR0 410 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 SCYL3Q8IZE3 742 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 DNAJC8O75937 253 aaPredicted RBP17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 MYL7Q01449 175 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 SLC27A3Q5K4L6 730 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 CCDC174Q6PII3 467 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 TRIM4Q9C037 500 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 ANAPC5Q9UJX4 755 aa17.09■□□□□ 0.33
SLC6A8-201ENST00000253122 UPP2O95045 317 aa17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 IFNB1P01574 187 aa17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 XRCC4Q13426 336 aa17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 C6orf163Q5TEZ5 329 aa17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 CCT6BQ92526 530 aa17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 SH3GL3Q99963 347 aa17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 RABGAP1Q9Y3P9 1069 aa17.08■□□□□ 0.33
SLC6A8-201ENST00000253122 RASA4BC9J798 803 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 RASA4O43374 803 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 SPAG7O75391 227 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 PON1P27169 355 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 PDIA5Q14554 519 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 RASIP1Q5U651 963 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 ZNF653Q96CK0 615 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 MMTAG2Q9BU76 263 aaKnown RBP17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 SLC12A6Q9UHW9 1150 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 IKBKGQ9Y6K9 419 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms