RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 FER1L6Q2WGJ9 1857 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 E7EVH7 732 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 EIF3DO15371 548 aaKnown RBP eCLIP10.99□□□□□ -0.65
COPB1-201ENST00000249923 TTI1O43156 1089 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 TBCAO75347 108 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 SOX5P35711 763 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 FKBP1AP62942 108 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 C10orf76Q5T2E6 689 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 KDM7AQ6ZMT4 941 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 TRMT1LQ7Z2T5 733 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 CPNE8Q86YQ8 564 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 IL31RAQ8NI17 732 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 UHMK1Q8TAS1 419 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 SLC35G2Q8TBE7 412 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 SLC20A1Q8WUM9 679 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 SEC14L1Q92503 715 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 ALG3Q92685 438 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.99□□□□□ -0.656e-7■■■□□ 15.6
COPB1-201ENST00000249923 CHORDC1Q9UHD1 332 aaPredicted RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 BZW2Q9Y6E2 419 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 TMEM150BA6NC51 233 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 G3V3G9 751 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 ITGB5P18084 799 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 CYP2J2P51589 502 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 STAT2P52630 851 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 ZNF844Q08AG5 666 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 NFIL3Q16649 462 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 ADAT2Q7Z6V5 191 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 DAAM2Q86T65 1068 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 NLGN1Q8N2Q7 840 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 CCDC114Q96M63 670 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 THAP2Q9H0W7 228 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 EPB41L4BQ9H329 900 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 DNAJC12Q9UKB3 198 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 NCANO14594 1321 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 A0A0A6YYK5 440 aaPredicted RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 PGRMC1O00264 195 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 DAPK3O43293 454 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 OPA1O60313 960 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 FLOT1O75955 427 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 VIL1P09327 827 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 HSPA1LP34931 641 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 MARCKSL1P49006 195 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 SEC24CP53992 1094 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 CFAP58Q5T655 872 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 KRT27Q7Z3Y8 459 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 QTRT2Q9H974 415 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 PARVGQ9HBI0 331 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 METTL14Q9HCE5 456 aaKnown RBP10.99□□□□□ -0.65
COPB1-201ENST00000249923 ACP6Q9NPH0 428 aa10.99□□□□□ -0.65
COPB1-201ENST00000249923 ATP8B3O60423 1300 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 CLRN2A0PK11 232 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 H2AFZP0C0S5 128 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 ABCB4P21439 1286 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 LSP1P33241 339 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 DGKZQ13574 1117 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 LLGL1Q15334 1064 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 NAA35Q5VZE5 725 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 H2AFVQ71UI9 128 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 WHAMMQ8TF30 809 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 ZNF526Q8TF50 670 aaPredicted RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 KAT5Q92993 513 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 TBC1D31Q96DN5 1066 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 MYCBPQ99417 103 aaPredicted RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 TRIM51Q9BSJ1 452 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 RANBP17Q9H2T7 1088 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 LUC7LQ9NQ29 371 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 SEPT11Q9NVA2 429 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 COL2A1P02458 1487 aaPredicted RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 FOXN3O00409 490 aaPredicted RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 PSMC2P35998 433 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 ZNF76P36508 570 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 ZYXQ15942 572 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 RBM26Q5T8P6 1007 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 PEX26Q7Z412 305 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 ARHGEF19Q8IW93 802 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 PBKQ96KB5 322 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 ATP6V1G3Q96LB4 118 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 LXNQ9BS40 222 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 STK33Q9BYT3 514 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 INTS2Q9H0H0 1204 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 TMBIM4Q9HC24 238 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
COPB1-201ENST00000249923 TMX2Q9Y320 296 aa10.98□□□□□ -0.65
COPB1-201ENST00000249923 FAM13AO94988 1023 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 PRELPP51888 382 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 PPP3CAQ08209 521 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
COPB1-201ENST00000249923 CNOT8Q9UFF9 292 aaKnown RBP10.97□□□□□ -0.65
COPB1-201ENST00000249923 ZNF536O15090 1300 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 KRIT1O00522 736 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 DHX15O43143 795 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms