RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 MYBL2P10244 700 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 JAK3P52333 1124 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 MYL7Q01449 175 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 KRT76Q01546 638 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 MEI1Q5TIA1 1274 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 GSPT2Q8IYD1 628 aaKnown RBP23.61■■□□□ 1.37
CLN6-201ENST00000249806 STK33Q9BYT3 514 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 GPR88Q9GZN0 384 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 GOLPH3Q9H4A6 298 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 LRRN2O75325 713 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 FERP16591 822 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 SOX5P35711 763 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 PAFAH1B1P43034 410 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 GTF2BQ00403 316 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 ITIH3Q06033 890 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 PRKG1Q13976 671 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 FAM102BQ5T8I3 360 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 ANO5Q75V66 913 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 TSKSQ9UJT2 592 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 ADAMTS5Q9UNA0 930 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 CD2APQ9Y5K6 639 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 CCND2P30279 289 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 SFNP31947 248 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 PHLDB3Q6NSJ2 640 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 KLRG1Q96E93 195 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 GDAP1L1Q96MZ0 367 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 APEX2Q9UBZ4 518 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 DMGDHQ9UI17 866 aaKnown RBP23.6■■□□□ 1.37
CLN6-201ENST00000249806 NENFQ9UMX5 172 aa23.6■■□□□ 1.37
CLN6-201ENST00000249806 PHIPQ8WWQ0 1821 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 RGS20O76081 388 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 MCM3P25205 808 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 NOP2P46087 812 aaKnown RBP23.59■■□□□ 1.37
CLN6-201ENST00000249806 MYBPC2Q14324 1141 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 NLRX1Q86UT6 975 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 APOBEC3FQ8IUX4 373 aaKnown RBP23.59■■□□□ 1.37
CLN6-201ENST00000249806 LMO3Q8TAP4 145 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 SGIP1Q9BQI5 828 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 MOV10L1Q9BXT6 1211 aaKnown RBP23.59■■□□□ 1.37
CLN6-201ENST00000249806 GGA3Q9NZ52 723 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 BTNL10A8MVZ5 291 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 KRT13P13646 458 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 SLC7A5Q01650 507 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 ALCAMQ13740 583 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 ARHGAP44Q17R89 818 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 CCNI2Q6ZMN8 369 aaPredicted RBP23.59■■□□□ 1.37
CLN6-201ENST00000249806 VPS36Q86VN1 386 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 OLIG1Q8TAK6 271 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 LNX1Q8TBB1 728 aaPredicted RBP23.59■■□□□ 1.37
CLN6-201ENST00000249806 U2AF1L4Q8WU68 220 aaKnown RBP23.59■■□□□ 1.37
CLN6-201ENST00000249806 RBM12Q9NTZ6 932 aaKnown RBP23.59■■□□□ 1.37
CLN6-201ENST00000249806 HSPBP1Q9NZL4 362 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 PCDHA10Q9Y5I2 948 aa23.59■■□□□ 1.37
CLN6-201ENST00000249806 WDR81Q562E7 1941 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 EMSYQ7Z589 1322 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 DOCK5Q9H7D0 1870 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 FAM170AA1A519 330 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 N4BP1O75113 896 aaKnown RBP23.58■■□□□ 1.37
CLN6-201ENST00000249806 VAMP7P51809 220 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 SOX10P56693 466 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 PPP3CAQ08209 521 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 PTPROQ16827 1216 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 CFAP221Q4G0U5 840 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 NLGN2Q8NFZ4 835 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 C12orf42Q96LP6 360 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 KIFC3Q9BVG8 833 aa23.58■■□□□ 1.37
CLN6-201ENST00000249806 C19orf81C9J6K1 198 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 SORBS3O60504 671 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 HIRAP54198 1017 aaPredicted RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 GYS2P54840 703 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 RNASE9P60153 205 aaKnown RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 SP4Q02446 784 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 CATSPERGQ6ZRH7 1159 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 INTS8Q75QN2 995 aaKnown RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 ZNF771Q7L3S4 317 aaPredicted RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 GLYCTKQ8IVS8 523 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 NSUN6Q8TEA1 469 aaKnown RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 INPP4AQ96PE3 977 aaPredicted RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 ANKEF1Q9NU02 776 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 GABBR1Q9UBS5 961 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 POLR2AP24928 1970 aaKnown RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 CCDC169A6NNP5 214 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 TULP1O00294 542 aaPredicted RBP23.57■■□□□ 1.36
CLN6-201ENST00000249806 ZNF862O60290 1169 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 XXYLT1Q8NBI6 393 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 SLC30A5Q8TAD4 765 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 PLEKHO2Q8TD55 490 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 GPRASP2Q96D09 838 aa23.57■■□□□ 1.36
CLN6-201ENST00000249806 GOLGA8IPA6NC78 632 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 GOLGA8JA6NMD2 632 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 H2AFZP0C0S5 128 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 KCNA2P16389 499 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 GCLMP48507 274 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 NCKAP1LP55160 1127 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 C1orf220Q5T0J3 134 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 CCDC70Q6NSX1 233 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 ZNF746Q6NUN9 644 aaPredicted RBP23.56■■□□□ 1.36
CLN6-201ENST00000249806 XRRA1Q6P2D8 792 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 H2AFVQ71UI9 128 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 ST6GALNAC4Q9H4F1 302 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms