RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TSKSQ9UJT2 592 aa14.28□□□□□ -0.12
LSM8-201ENST00000249299 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
LSM8-201ENST00000249299 ZSWIM8A7E2V4 1837 aa14.28□□□□□ -0.12
LSM8-201ENST00000249299 GOLGA6L19H0YKK7 550 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 PPP1R37O75864 691 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 C22orf31O95567 290 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 FGFR1OPO95684 399 aaKnown RBP14.27□□□□□ -0.12
LSM8-201ENST00000249299 ADAM17P78536 824 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 GTF2BQ00403 316 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 PTPN11Q06124 597 aaPredicted RBP14.27□□□□□ -0.12
LSM8-201ENST00000249299 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 MYBPC2Q14324 1141 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 GRIK4Q16099 956 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 NFIL3Q16649 462 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 KIAA0753Q2KHM9 967 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 SLC9C1Q4G0N8 1177 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 L1TD1Q5T7N2 865 aaKnown RBP14.27□□□□□ -0.12
LSM8-201ENST00000249299 SPATA1Q5VX52 437 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 FBXO46Q6PJ61 603 aaPredicted RBP14.27□□□□□ -0.12
LSM8-201ENST00000249299 DHX40Q8IX18 779 aaKnown RBP14.27□□□□□ -0.12
LSM8-201ENST00000249299 LINC01465Q8N7H1 131 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 SCFD1Q8WVM8 642 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 P2RX5Q93086 422 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 NFKBIZQ9BYH8 718 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 ZHX3Q9H4I2 956 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 TMEM206Q9H813 350 aa14.27□□□□□ -0.12
LSM8-201ENST00000249299 PAK6Q9NQU5 681 aaPredicted RBP14.27□□□□□ -0.12
LSM8-201ENST00000249299 PCNTO95613 3336 aa14.27□□□□□ -0.13
LSM8-201ENST00000249299 PDXKO00764 312 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 PGK1P00558 417 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 MYL3P08590 195 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
LSM8-201ENST00000249299 PTGS1P23219 599 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 KLRC1P26715 233 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 NPTX2P47972 431 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 EFNA5P52803 228 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 NCAPHQ15003 741 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 KNOP1Q1ED39 458 aaKnown RBP14.26□□□□□ -0.13
LSM8-201ENST00000249299 EDRF1Q3B7T1 1238 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 NFRKBQ6P4R8 1299 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 MTHFD1LQ6UB35 978 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 TRMT1LQ7Z2T5 733 aaKnown RBP14.26□□□□□ -0.13
LSM8-201ENST00000249299 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
LSM8-201ENST00000249299 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.26□□□□□ -0.13
LSM8-201ENST00000249299 POLR3FQ9H1D9 316 aaPredicted RBP14.26□□□□□ -0.13
LSM8-201ENST00000249299 OCEL1Q9H607 264 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 GRPEL1Q9HAV7 217 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 ARHGAP28Q9P2N2 729 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 EXOC7Q9UPT5 735 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 TRAF3IP3Q9Y228 551 aa14.26□□□□□ -0.13
LSM8-201ENST00000249299 MYH9P35579 1960 aaKnown RBP14.26□□□□□ -0.13
LSM8-201ENST00000249299 SMIM35A0A1B0GVV1 85 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 SFI1A8K8P3 1242 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 GCNT3O95395 438 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 SMIM10L2AP0DMW4 78 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 SMIM10L2BP0DMW5 78 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 PEX3P56589 373 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 BEX3Q00994 111 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 TFDP1Q14186 410 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 HSP90AA2PQ14568 343 aaPredicted RBP14.25□□□□□ -0.13
LSM8-201ENST00000249299 LRRC41Q15345 812 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 PCBP1Q15365 356 aaKnown RBP eCLIP14.25□□□□□ -0.13
LSM8-201ENST00000249299 KCNA10Q16322 511 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 ZCWPW2Q504Y3 356 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 EFCAB12Q6NXP0 572 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 TTI2Q6NXR4 508 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 TAF2Q6P1X5 1199 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 HAUS6Q7Z4H7 955 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 SMYD4Q8IYR2 804 aaPredicted RBP14.25□□□□□ -0.13
LSM8-201ENST00000249299 NME8Q8N427 588 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 TMEM161BQ8NDZ6 487 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 TSG101Q99816 390 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 SH2D3AQ9BRG2 576 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 C2orf40Q9H1Z8 148 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 KCTD10Q9H3F6 313 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 TMEM134Q9H6X4 195 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 KMT5AQ9NQR1 393 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 DOCK5Q9H7D0 1870 aa14.25□□□□□ -0.13
LSM8-201ENST00000249299 CEP350Q5VT06 3117 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 ASGR1P07306 291 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 GLRA2P23416 452 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 FKBP3Q00688 224 aaKnown RBP14.24□□□□□ -0.13
LSM8-201ENST00000249299 SPAG1Q07617 926 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 MARCH8Q5T0T0 291 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 CDCA2Q69YH5 1023 aaPredicted RBP14.24□□□□□ -0.13
LSM8-201ENST00000249299 MAEAQ7L5Y9 396 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 HS2ST1Q7LGA3 356 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 ZC3H3Q8IXZ2 948 aaKnown RBP14.24□□□□□ -0.13
LSM8-201ENST00000249299 AOPEPQ8N6M6 819 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 RNF214Q8ND24 703 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 ARMC5Q96C12 935 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 ACCSQ96QU6 501 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 MAP7D2Q96T17 732 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 THAP9Q9H5L6 903 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 GPRC5CQ9NQ84 441 aa14.24□□□□□ -0.13
LSM8-201ENST00000249299 TYW1Q9NV66 732 aaKnown RBP14.24□□□□□ -0.13
LSM8-201ENST00000249299 SUCLA2Q9P2R7 463 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms