RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MYL7Q01449 175 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 ZNF746Q6NUN9 644 aaPredicted RBP27.75■■■□□ 2.03
RAB40C-201ENST00000248139 LDHDQ86WU2 507 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 WDR11Q9BZH6 1224 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 ACP6Q9NPH0 428 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 BCCIPQ9P287 314 aaKnown RBP eCLIP27.75■■■□□ 2.03
RAB40C-201ENST00000248139 COG5Q9UP83 839 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 NPM3O75607 178 aaKnown RBP27.74■■■□□ 2.03
RAB40C-201ENST00000248139 SEC24CP53992 1094 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 TMOD4Q9NZQ9 345 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 COL20A1Q9P218 1284 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 AMFRQ9UKV5 643 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 VIL1P09327 827 aaKnown RBP27.74■■■□□ 2.03
RAB40C-201ENST00000248139 FKBP1AP62942 108 aaKnown RBP27.74■■■□□ 2.03
RAB40C-201ENST00000248139 MAPK7Q13164 816 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 MREGQ8N565 214 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 KAT5Q92993 513 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 HES6Q96HZ4 224 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 DMAC2Q9NW81 257 aa27.74■■■□□ 2.03
RAB40C-201ENST00000248139 SUCLA2Q9P2R7 463 aaPredicted RBP27.74■■■□□ 2.03
RAB40C-201ENST00000248139 K7ENM7 598 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 NR1D1P20393 614 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 HSPA9P38646 679 aaKnown RBP27.73■■■□□ 2.03
RAB40C-201ENST00000248139 SKOR1P84550 965 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 SLC15A2Q16348 729 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 UBLCP1Q8WVY7 318 aaPredicted RBP27.73■■■□□ 2.03
RAB40C-201ENST00000248139 APEX2Q9UBZ4 518 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 TNFAIP3P21580 790 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 GCLMP48507 274 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 CTNNBL1Q8WYA6 563 aaPredicted RBP27.73■■■□□ 2.03
RAB40C-201ENST00000248139 CBWD1Q9BRT8 395 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 FAM107BQ9H098 131 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 GOPCQ9HD26 462 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 HOMER2Q9NSB8 354 aa27.73■■■□□ 2.03
RAB40C-201ENST00000248139 TMEM110-MUSTN1A8MSY1 372 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 EBAG9O00559 213 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 NDUFAB1O14561 156 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 USP8P40818 1118 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 ZNF131P52739 623 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 BFSP1Q12934 665 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 ARHGEF19Q8IW93 802 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 LMBR1Q8WVP7 490 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 RANBP17Q9H2T7 1088 aaKnown RBP27.72■■■□□ 2.03
RAB40C-201ENST00000248139 UBE2TQ9NPD8 197 aaPredicted RBP27.72■■■□□ 2.03
RAB40C-201ENST00000248139 FAM169AQ9Y6X4 670 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 CES2O00748 559 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 PADI6Q6TGC4 694 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 CPXCR1Q8N123 301 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 ATP6V1G3Q96LB4 118 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 TEKT3Q9BXF9 490 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 ERVK-5Q9HDB9 667 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 EMSYQ7Z589 1322 aa27.72■■■□□ 2.03
RAB40C-201ENST00000248139 MYH11P35749 1972 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 SPDYE2BA6NHP3 402 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 NFIBO00712 420 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 SPDYE6P0CI01 402 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 PPP3CAQ08209 521 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 TMOD2Q9NZR1 351 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 ZNF70Q9UC06 446 aaPredicted RBP27.71■■■□□ 2.03
RAB40C-201ENST00000248139 KIF13BQ9NQT8 1826 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 CTNNA1P35221 906 aaKnown RBP27.71■■■□□ 2.03
RAB40C-201ENST00000248139 GLG1Q92896 1179 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 SYT11Q9BT88 431 aa27.71■■■□□ 2.03
RAB40C-201ENST00000248139 LMNB1P20700 586 aa27.7■■■□□ 2.03
RAB40C-201ENST00000248139 LIG3P49916 1009 aa27.7■■■□□ 2.03
RAB40C-201ENST00000248139 PACS2Q86VP3 889 aa27.7■■■□□ 2.03
RAB40C-201ENST00000248139 RASGEF1CQ8N431 466 aa27.7■■■□□ 2.03
RAB40C-201ENST00000248139 RFFLQ8WZ73 363 aa27.7■■■□□ 2.03
RAB40C-201ENST00000248139 GPRC5CQ9NQ84 441 aa27.7■■■□□ 2.03
RAB40C-201ENST00000248139 HERC5Q9UII4 1024 aaKnown RBP27.7■■■□□ 2.03
RAB40C-201ENST00000248139 MRPL11Q9Y3B7 192 aaKnown RBP27.7■■■□□ 2.03
RAB40C-201ENST00000248139 A0A0A6YYK5 440 aaPredicted RBP27.7■■■□□ 2.02
RAB40C-201ENST00000248139 GOLGA8IPA6NC78 632 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 GOLGA8JA6NMD2 632 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 DDX3YO15523 660 aaKnown RBP27.7■■■□□ 2.02
RAB40C-201ENST00000248139 INPP5BP32019 993 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 LSP1P33241 339 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 MAGEA9P43362 315 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 C7orf43Q8WVR3 580 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 ALG3Q92685 438 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 TSPYL1Q9H0U9 437 aa27.7■■■□□ 2.02
RAB40C-201ENST00000248139 LLGL1Q15334 1064 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 CPNE8Q86YQ8 564 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 SYCE1Q8N0S2 351 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 LMO3Q8TAP4 145 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 KCNH7Q9NS40 1196 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 H0YGN5 161 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 MARCKSL1P49006 195 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 PPATQ06203 517 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 KDM7AQ6ZMT4 941 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 CHURC1Q8WUH1 139 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 MKNK1Q9BUB5 465 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 VCPKMTQ9H867 229 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 NFS1Q9Y697 457 aa27.69■■■□□ 2.02
RAB40C-201ENST00000248139 ATMINO43313 823 aaPredicted RBP27.68■■■□□ 2.02
RAB40C-201ENST00000248139 MIER3Q7Z3K6 550 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 PLEKHO2Q8TD55 490 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 CALR3Q96L12 384 aaKnown RBP27.68■■■□□ 2.02
RAB40C-201ENST00000248139 DCDC2CA8MYV0 355 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 BACH1O14867 736 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms