RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 MTRQ99707 1265 aa23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 PLVAPQ9BX97 442 aa23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 INO80BQ9C086 356 aaPredicted RBP23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 COG5Q9UP83 839 aa23.59■■□□□ 1.37
HCFC1R1-201ENST00000248089 GAS2O43903 313 aaKnown RBP23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 SRGAP2CP0DJJ0 459 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 TRAPPC10P48553 1259 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 MCM2P49736 904 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 FAM189BP81408 668 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 AAK1Q2M2I8 961 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 MCTP1Q6DN14 999 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 CATSPER4Q7RTX7 472 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 PIGOQ8TEQ8 1089 aa23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 PRPF31Q8WWY3 499 aaKnown RBP23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 ELAC1Q9H777 363 aaKnown RBP23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 ALG13Q9NP73 1137 aaKnown RBP23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 PIN4Q9Y237 131 aaKnown RBP23.58■■□□□ 1.37
HCFC1R1-201ENST00000248089 A0A087WWV3 80 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 LYPLA2O95372 231 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 U2AF2P26368 475 aaKnown RBP eCLIP23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 GJB2P29033 226 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 KCNQ1P51787 676 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 LAMTOR4Q0VGL1 99 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 TWF2Q6IBS0 349 aaKnown RBP23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 ECHDC2Q86YB7 292 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 ABI1Q8IZP0 508 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 DACT1Q9NYF0 836 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 HCSTQ9UBK5 93 aa23.57■■□□□ 1.36
HCFC1R1-201ENST00000248089 HOXA2O43364 376 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 KLHL23Q8NBE8 558 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 ERMNQ8TAM6 284 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 LMAN2LQ9H0V9 348 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 NSUN3Q9H649 340 aaKnown RBP23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 IFT122Q9HBG6 1241 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 XPNPEP1Q9NQW7 623 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 ANKEF1Q9NU02 776 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 TTC28Q96AY4 2481 aa23.56■■□□□ 1.36
HCFC1R1-201ENST00000248089 H3BQV1 296 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 MED24O75448 989 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 RARRES1P49788 294 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 TCEAL5Q5H9L2 206 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 FERMT3Q86UX7 667 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 RNF149Q8NC42 400 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 P2RX5Q93086 422 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 TMEM117Q9H0C3 514 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 TUFT1Q9NNX1 390 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 CHST12Q9NRB3 414 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 TYW1Q9NV66 732 aaKnown RBP23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 PLAGL2Q9UPG8 496 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 SMC3Q9UQE7 1217 aa23.55■■□□□ 1.36
HCFC1R1-201ENST00000248089 A0A0U1RQF3 1178 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 USO1O60763 962 aaKnown RBP23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 DGAT1O75907 488 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 ITGB1P05556 798 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 SPATA31C1P0DKV0 1188 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 POTEGQ6S5H5 508 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 CATSPER3Q86XQ3 398 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 ADAMTS19Q8TE59 1207 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 UBE2ZQ9H832 354 aaPredicted RBP23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 AAASQ9NRG9 546 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 RNF19AQ9NV58 838 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 PCDHB6Q9Y5E3 794 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 PCDHB12Q9Y5F1 795 aa23.54■■□□□ 1.36
HCFC1R1-201ENST00000248089 ATF7P17544 494 aaPredicted RBP23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 PHKA2P46019 1235 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 NAALADL2Q58DX5 795 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 CLLU1OSQ5K130 101 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 EP400NLQ6ZTU2 488 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 SRGAP1Q7Z6B7 1085 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 LRRC43Q8N309 656 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 HELQQ8TDG4 1101 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 CASD1Q96PB1 797 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 MINDY3Q9H8M7 445 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 AGPAT5Q9NUQ2 364 aa23.53■■□□□ 1.36
HCFC1R1-201ENST00000248089 ASAP2O43150 1006 aa23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 PTGDRQ13258 359 aa23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 MXD4Q14582 209 aaPredicted RBP23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 LONRF3Q496Y0 759 aa23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 ZNF598Q86UK7 904 aaKnown RBP23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 THNSL1Q8IYQ7 743 aa23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 COLGALT1Q8NBJ5 622 aa23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 POLR3CQ9BUI4 534 aaPredicted RBP23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.52■■□□□ 1.36
HCFC1R1-201ENST00000248089 ERLIN2O94905 339 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 EOMESO95936 686 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 LAG3P18627 525 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 KCNA5P22460 613 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 DNAJB1P25685 340 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 TFDP1Q14186 410 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 HAUS3Q68CZ6 603 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 MAEAQ7L5Y9 396 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 C4orf32Q8N8J7 132 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 SPPL3Q8TCT6 385 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 ASAP3Q8TDY4 903 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 LPPQ93052 612 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 NACC1Q96RE7 527 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 POLR3FQ9H1D9 316 aaPredicted RBP23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 CWH43Q9H720 699 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 FAM105AQ9NUU6 356 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms