RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 GALNT17Q6IS24 598 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 NLGN1Q8N2Q7 840 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 UBE2TQ9NPD8 197 aaPredicted RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 FAM237AA0A1B0GTK4 181 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 TXNDC9O14530 226 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 ANP32DO95626 131 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 SERPING1P05155 500 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 RPL13P26373 211 aaKnown RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 STAT1P42224 750 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 RANBP1P43487 201 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 STAT2P52630 851 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 NPEPPSP55786 919 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 LRRC14Q15048 493 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 PREPLQ4J6C6 727 aaPredicted RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 ZNF365Q70YC5 407 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 MIER3Q7Z3K6 550 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 HAS1Q92839 578 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 DHX36Q9H2U1 1008 aaKnown RBP12.43□□□□□ -0.42
SOX9-201ENST00000245479 ECT2Q9H8V3 914 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 SETSIPP0DME0 302 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 PEX3P56589 373 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 OSTNP61366 133 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 CYFIP1Q7L576 1253 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 SPATA20Q8TB22 786 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 MDM1Q8TC05 714 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 ETNK1Q9HBU6 452 aa12.43□□□□□ -0.42
SOX9-201ENST00000245479 CCT8L1PA6NM43 557 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 CCDC188H7C350 402 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 EML1O00423 815 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 POLR2MP0CAP2 368 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 ATP2A2P16615 1042 aaKnown RBP12.42□□□□□ -0.42
SOX9-201ENST00000245479 RCAN1P53805 252 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 ANKRD20A3Q5VUR7 823 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 SEPT14Q6ZU15 432 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 FUKQ8N0W3 1084 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 EIF2AK1Q9BQI3 630 aaKnown RBP12.42□□□□□ -0.42
SOX9-201ENST00000245479 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 ARHGEF10LQ9HCE6 1279 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 TBK1Q9UHD2 729 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 ATP2A1O14983 1001 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 RAD51CO43502 376 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 FGGP02679 453 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 NR3C1P04150 777 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 PSMD2Q13200 908 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 SEZ6Q53EL9 994 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 PLA2G4FQ68DD2 849 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 CCDC62Q6P9F0 684 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 CEP128Q6ZU80 1094 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 KIF2BQ8N4N8 673 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 BTBD6Q96KE9 485 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 PDS5AQ29RF7 1337 aaKnown RBP12.42□□□□□ -0.42
SOX9-201ENST00000245479 LAD1O00515 517 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 SLC16A4O15374 487 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 SART1O43290 800 aaKnown RBP12.42□□□□□ -0.42
SOX9-201ENST00000245479 PFDN1O60925 122 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 CYP11B2P19099 503 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 TNIP1Q15025 636 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 APOBEC3HQ6NTF7 200 aaKnown RBP12.42□□□□□ -0.42
SOX9-201ENST00000245479 PASD1Q8IV76 773 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 PPP1R14CQ8TAE6 165 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 AENQ8WTP8 325 aaKnown RBP12.42□□□□□ -0.42
SOX9-201ENST00000245479 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 STAMBPL1Q96FJ0 436 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 POP1Q99575 1024 aaKnown RBP12.42□□□□□ -0.42
SOX9-201ENST00000245479 C7orf25Q9BPX7 421 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 OSGEPQ9NPF4 335 aa12.42□□□□□ -0.42
SOX9-201ENST00000245479 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
SOX9-201ENST00000245479 UAP1Q16222 522 aaPredicted RBP12.41□□□□□ -0.42
SOX9-201ENST00000245479 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 GUF1Q8N442 669 aaKnown RBP12.41□□□□□ -0.42
SOX9-201ENST00000245479 SLC30A5Q8TAD4 765 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 XPO6Q96QU8 1125 aaKnown RBP12.41□□□□□ -0.42
SOX9-201ENST00000245479 AZI2Q9H6S1 392 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 STK17AQ9UEE5 414 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 THAP12O43422 761 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 CIB2O75838 187 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 BAG2O95816 211 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 FAM153BP0C7A2 387 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 RAD23BP54727 409 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 PPP4CP60510 307 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 DR1Q01658 176 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 KCNB1Q14721 858 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 FAM153CQ494X1 144 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 TTMPQ5BVD1 217 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 MIIPQ5JXC2 388 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 C6orf118Q5T5N4 469 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 AADACL2Q6P093 401 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 FAM47EQ6ZV65 393 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 SCYL3Q8IZE3 742 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 MTA3Q9BTC8 594 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 ATP6V0A4Q9HBG4 840 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 RIC8AQ9NPQ8 531 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 FAM153AQ9UHL3 310 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 L3MBTL1Q9Y468 752 aa12.41□□□□□ -0.42
SOX9-201ENST00000245479 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms