RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FAM81BQ96LP2 452 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 SCHIP1Q9P0W5 487 aaPredicted RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 LSP1P33241 339 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 MLH1P40692 756 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 ZBTB1Q9Y2K1 713 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 ABCB11O95342 1321 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 MGEA5O60502 916 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 KCNA1Q09470 495 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 NUP93Q8N1F7 819 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 ERLEC1Q96DZ1 483 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 ASCC2Q9H1I8 757 aaPredicted RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 CYP2E1P05181 493 aaPredicted RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 ESRRGP62508 458 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 LRRC8EQ6NSJ5 796 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 CASKIN2Q8WXE0 1202 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 RUNDC3BQ96NL0 473 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 INTS2Q9H0H0 1204 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 SUGT1Q9Y2Z0 365 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 NINQ8N4C6 2090 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 SPARCL1Q14515 664 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 LAYNQ6UX15 382 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 SLC25A41Q8N5S1 370 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 TMA16Q96EY4 203 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 SH2D4AQ9H788 454 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 AKT3Q9Y243 479 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 CD44P16070 742 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 NMT1P30419 496 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 IZUMO3Q5VZ72 239 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 EMBQ6PCB8 327 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 TRIM67Q6ZTA4 783 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 ZNF229Q9UJW7 825 aa8.04□□□□□ -1.12
RIF1-201ENST00000243326 SCAF8Q9UPN6 1271 aaKnown RBP8.04□□□□□ -1.12
RIF1-201ENST00000243326 HLFQ16534 295 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 C2CD6Q53TS8 623 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 NCAPG2Q86XI2 1143 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 NCAPGQ9BPX3 1015 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 TDP2O95551 362 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 NBPF20Q3BBV1 942 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 PACS2Q86VP3 889 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 NSMCE1Q8WV22 266 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 LRRC37BQ96QE4 947 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 TMEM60Q9H2L4 133 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 LPXNO60711 386 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 ZBED1O96006 694 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 TRAF3IP3Q9Y228 551 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 CLDN3O15551 220 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 FAM149B1Q96BN6 582 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 BAG5Q9UL15 447 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 ABCB5Q2M3G0 1257 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 PSMC5P62195 406 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 HSP90AA5PQ58FG0 334 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 CRLF3Q8IUI8 442 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 LARGE2Q8N3Y3 721 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 NLRP4Q96MN2 994 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 LRRC34Q8IZ02 419 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 EPS8L3Q8TE67 593 aaKnown RBP8.03□□□□□ -1.12
RIF1-201ENST00000243326 CYGBQ8WWM9 190 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 NOD1Q9Y239 953 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 ZMYM3Q14202 1370 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 SERPINB3P29508 390 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 CTCFP49711 727 aaPredicted RBP8.03□□□□□ -1.12
RIF1-201ENST00000243326 PLIN5Q00G26 463 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 KCNH2Q12809 1159 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 CUL1Q13616 776 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 BRDTQ58F21 947 aaPredicted RBP8.03□□□□□ -1.12
RIF1-201ENST00000243326 PPP1R18Q6NYC8 613 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 TARSL2A2RTX5 802 aaKnown RBP8.03□□□□□ -1.12
RIF1-201ENST00000243326 USP17L10C9JJH3 530 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 CTIFO43310 598 aaKnown RBP8.03□□□□□ -1.12
RIF1-201ENST00000243326 KDM1AO60341 852 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 TRIM55Q9BYV6 548 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 UNC45AQ9H3U1 944 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 LY9Q9HBG7 655 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 FBXO2Q9UK22 296 aaPredicted RBP8.03□□□□□ -1.12
RIF1-201ENST00000243326 THOC5Q13769 683 aaKnown RBP8.03□□□□□ -1.12
RIF1-201ENST00000243326 MIS12Q9H081 205 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 TLK1Q9UKI8 766 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 CORO7P57737 925 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 REXO1L1PQ8IX06 675 aa8.03□□□□□ -1.12
RIF1-201ENST00000243326 STX1BP61266 288 aa8.02□□□□□ -1.12
RIF1-201ENST00000243326 SZRD1Q7Z422 152 aa8.02□□□□□ -1.12
RIF1-201ENST00000243326 DCTN3O75935 186 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 CDR2Q01850 454 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 RASGRF1Q13972 1273 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 CAPRIN1Q14444 709 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 NOD2Q9HC29 1040 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 KIAA0100Q14667 2235 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 CACNB2Q08289 660 aaPredicted RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 TC2NQ8N9U0 490 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 ZNF280CQ8ND82 737 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 PACSIN1Q9BY11 444 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 ING2Q9H160 280 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 SPC25Q9HBM1 224 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 PRDM5Q9NQX1 630 aaPredicted RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 AKR1B1P15121 316 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 PTPREP23469 700 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 ZMAT2Q96NC0 199 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms