RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 UBAP1LF5GYI3 381 aa16.15■□□□□ 0.18
HOXC12-201ENST00000243103 EEF2P13639 858 aaKnown RBP16.15■□□□□ 0.18
HOXC12-201ENST00000243103 KHDC1Q4VXA5 237 aaKnown RBP16.15■□□□□ 0.18
HOXC12-201ENST00000243103 MEI1Q5TIA1 1274 aa16.15■□□□□ 0.18
HOXC12-201ENST00000243103 PDCD7Q8N8D1 485 aaKnown RBP16.15■□□□□ 0.18
HOXC12-201ENST00000243103 KIAA0895Q8NCT3 520 aa16.15■□□□□ 0.18
HOXC12-201ENST00000243103 PKD2L1Q9P0L9 805 aa16.15■□□□□ 0.18
HOXC12-201ENST00000243103 ARMCX3Q9UH62 379 aaPredicted RBP16.15■□□□□ 0.18
HOXC12-201ENST00000243103 SERPINB3P29508 390 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 SEPT7Q16181 437 aaKnown RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 CCDC84Q86UT8 332 aaPredicted RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 TRIM42Q8IWZ5 723 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 FAM84BQ96KN1 310 aaPredicted RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 LRRC37BQ96QE4 947 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 RNF26Q9BY78 433 aaPredicted RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 CEP350Q5VT06 3117 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 USP1O94782 785 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 PGM3O95394 542 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 GHRP10912 638 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 GLYCTKQ8IVS8 523 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 PPFIBP2Q8ND30 876 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 MAGEC3Q8TD91 643 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 ZNF384Q8TF68 577 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 SUDS3Q9H7L9 328 aaPredicted RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 RNPEPL1Q9HAU8 725 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 NPHS2Q9NP85 383 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 WDR35Q9P2L0 1181 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 RIC1Q4ADV7 1423 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 FAM200BP0CF97 657 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 CALB2P22676 271 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 NEK3P51956 506 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 MRPS35P82673 323 aaKnown RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 NAB2Q15742 525 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 MAN2A1Q16706 1144 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 ZNF365Q70YC5 407 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 ATXN2LQ8WWM7 1075 aaKnown RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 TBC1D10AQ9BXI6 508 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 TRIM9Q9C026 710 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 DENND2DQ9H6A0 471 aaPredicted RBP16.14■□□□□ 0.17
HOXC12-201ENST00000243103 UBN1Q9NPG3 1134 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
HOXC12-201ENST00000243103 AFF2P51816 1311 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 CLIC2O15247 247 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 OATP04181 439 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 SCG2P13521 617 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 MESDQ14696 234 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 ZYXQ15942 572 aaKnown RBP16.13■□□□□ 0.17
HOXC12-201ENST00000243103 NSMFQ6X4W1 530 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 DSTYKQ6XUX3 929 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
HOXC12-201ENST00000243103 CFAP61Q8NHU2 1237 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 C1orf54Q8WWF1 131 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 CARD9Q9H257 536 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 ARL2BPQ9Y2Y0 163 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 WASF2Q9Y6W5 498 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 A6NHS1 94 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 BMP15O95972 392 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 KRT15P19012 456 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 HIBADHP31937 336 aaKnown RBP16.13■□□□□ 0.17
HOXC12-201ENST00000243103 RASSF2P50749 326 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 SHROOM1Q2M3G4 852 aaPredicted RBP16.13■□□□□ 0.17
HOXC12-201ENST00000243103 AGBL2Q5U5Z8 902 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 ECHDC2Q86YB7 292 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 CD302Q8IX05 232 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 GIMAP8Q8ND71 665 aaPredicted RBP16.13■□□□□ 0.17
HOXC12-201ENST00000243103 TSG101Q99816 390 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 SH2D3AQ9BRG2 576 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 SHCBP1LQ9BZQ2 653 aa16.13■□□□□ 0.17
HOXC12-201ENST00000243103 ANKRD33BA6NCL7 494 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 KPNB1Q14974 876 aaKnown RBP16.12■□□□□ 0.17
HOXC12-201ENST00000243103 SLC5A9Q2M3M2 681 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 LRIG3Q6UXM1 1119 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 TMTC2Q8N394 836 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 STK32AQ8WU08 396 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
HOXC12-201ENST00000243103 CALML4Q96GE6 196 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 HIC2Q96JB3 615 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 BTBD6Q96KE9 485 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 AMFRQ9UKV5 643 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 MEIS1O00470 390 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 ATP6V1B1P15313 513 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 MARCKSL1P49006 195 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 UBXN2AP68543 259 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 PPP2R5CQ13362 524 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 CNGA2Q16280 664 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 HERC4Q5GLZ8 1057 aaPredicted RBP16.12■□□□□ 0.17
HOXC12-201ENST00000243103 TAOK1Q7L7X3 1001 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 EXOC3L1Q86VI1 746 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 CPNE8Q86YQ8 564 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 BLIDQ8IZY5 108 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 UTP4Q969X6 686 aaKnown RBP16.12■□□□□ 0.17
HOXC12-201ENST00000243103 BICD1Q96G01 975 aa16.12■□□□□ 0.17
HOXC12-201ENST00000243103 IKZF4Q9H2S9 585 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms