RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 PPP1R16BQ96T49 567 aa18.69■□□□□ 0.58
CLTA-201ENST00000242285 SH2D3AQ9BRG2 576 aa18.69■□□□□ 0.58
CLTA-201ENST00000242285 STK24Q9Y6E0 443 aa18.69■□□□□ 0.58
CLTA-201ENST00000242285 DGAT1O75907 488 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 LINC00271P0C7V0 271 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 SPATA31C1P0DKV0 1188 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 SFPQP23246 707 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLTA-201ENST00000242285 RPA1P27694 616 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 PRPHP41219 470 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 PDIA5Q14554 519 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 COL19A1Q14993 1142 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 EMC2Q15006 297 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 RHPN2Q8IUC4 686 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 TMEM192Q8IY95 271 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 ZNF579Q8NAF0 562 aaKnown RBP18.68■□□□□ 0.58
CLTA-201ENST00000242285 PSPC1Q8WXF1 523 aaKnown RBP18.68■□□□□ 0.58
CLTA-201ENST00000242285 SCLT1Q96NL6 688 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 TRAIPQ9BWF2 469 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 CHST12Q9NRB3 414 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 TMEM161AQ9NX61 479 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 DACT1Q9NYF0 836 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 LRFN2Q9ULH4 789 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 COL4A3BPQ9Y5P4 624 aa18.68■□□□□ 0.58
CLTA-201ENST00000242285 H3BQV1 296 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 NCK2O43639 380 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 ZSCAN20P17040 1043 aaPredicted RBP18.67■□□□□ 0.58
CLTA-201ENST00000242285 TECP42680 631 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 RARRES1P49788 294 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 POU5F1BQ06416 359 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 BTG3Q14201 252 aaPredicted RBP18.67■□□□□ 0.58
CLTA-201ENST00000242285 PCBP1Q15365 356 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLTA-201ENST00000242285 HAUS3Q68CZ6 603 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 RSPH1Q8WYR4 309 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 MTRQ99707 1265 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 PLVAPQ9BX97 442 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 RAB34Q9BZG1 259 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 LMAN2LQ9H0V9 348 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 IFT122Q9HBG6 1241 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.67■□□□□ 0.58
CLTA-201ENST00000242285 DBR1Q9UK59 544 aaKnown RBP18.67■□□□□ 0.58
CLTA-201ENST00000242285 PCDHB7Q9Y5E2 793 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
CLTA-201ENST00000242285 A0A087WZ62 844 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 ZBTB39O15060 712 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 HOXA2O43364 376 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 PTGDRQ13258 359 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 MXD4Q14582 209 aaPredicted RBP18.66■□□□□ 0.58
CLTA-201ENST00000242285 NAALADL2Q58DX5 795 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 SRGAP1Q7Z6B7 1085 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 FERMT3Q86UX7 667 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 IGSF22Q8N9C0 903 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 INTS4Q96HW7 963 aaKnown RBP18.66■□□□□ 0.58
CLTA-201ENST00000242285 NACC1Q96RE7 527 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 FDXACB1Q9BRP7 624 aaPredicted RBP18.66■□□□□ 0.58
CLTA-201ENST00000242285 ATP6V0A4Q9HBG4 840 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 XPNPEP1Q9NQW7 623 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
CLTA-201ENST00000242285 TDRD15B5MCY1 1934 aaKnown RBP18.66■□□□□ 0.58
CLTA-201ENST00000242285 TCF20Q9UGU0 1960 aaKnown RBP18.66■□□□□ 0.58
CLTA-201ENST00000242285 A0A0U1RQF3 1178 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 EOMESO95936 686 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 PDCP20941 246 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 BMPR1AP36894 532 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 LAMTOR4Q0VGL1 99 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 GPM6BQ13491 265 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 LARP1BQ659C4 914 aaKnown RBP18.65■□□□□ 0.58
CLTA-201ENST00000242285 MCTP1Q6DN14 999 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 IFNLR1Q8IU57 520 aaPredicted RBP18.65■□□□□ 0.58
CLTA-201ENST00000242285 PRPF31Q8WWY3 499 aaKnown RBP18.65■□□□□ 0.58
CLTA-201ENST00000242285 P2RX5Q93086 422 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 CCDC43Q96MW1 224 aaKnown RBP18.65■□□□□ 0.58
CLTA-201ENST00000242285 C11orf84Q9BUA3 381 aaPredicted RBP18.65■□□□□ 0.58
CLTA-201ENST00000242285 NSUN3Q9H649 340 aaKnown RBP18.65■□□□□ 0.58
CLTA-201ENST00000242285 FAM50BQ9Y247 325 aa18.65■□□□□ 0.58
CLTA-201ENST00000242285 GPR37L1O60883 481 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 MED24O75448 989 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 KCNA5P22460 613 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 NBR1Q14596 966 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 FAM178BQ8IXR5 827 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.64■□□□□ 0.57
CLTA-201ENST00000242285 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 PABPC5Q96DU9 382 aaKnown RBP18.64■□□□□ 0.57
CLTA-201ENST00000242285 ZNF668Q96K58 619 aaPredicted RBP18.64■□□□□ 0.57
CLTA-201ENST00000242285 NLRP4Q96MN2 994 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 NFKBIZQ9BYH8 718 aa18.64■□□□□ 0.57
CLTA-201ENST00000242285 PI4K2BG5E9Z4 385 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 SKIP12755 728 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 CTNNB1P35222 781 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 PLA2G5P39877 138 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 ATP2C1P98194 919 aaPredicted RBP18.63■□□□□ 0.57
CLTA-201ENST00000242285 TMEM31Q5JXX7 168 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 ARL6IP4Q66PJ3 421 aaKnown RBP18.63■□□□□ 0.57
CLTA-201ENST00000242285 BRAPQ7Z569 592 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 ZNF598Q86UK7 904 aaKnown RBP18.63■□□□□ 0.57
CLTA-201ENST00000242285 ECHDC2Q86YB7 292 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 MCPH1Q8NEM0 835 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 PIGOQ8TEQ8 1089 aa18.63■□□□□ 0.57
CLTA-201ENST00000242285 LRWD1Q9UFC0 647 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms