RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 GBP3Q9H0R5 595 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 F2P00734 622 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 EPB41P11171 864 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 HYIQ5T013 277 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 LMBR1Q8WVP7 490 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 NIFKQ9BYG3 293 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 MAN1B1Q9UKM7 699 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 A0A1W2PQ45 241 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 A0A1W2PQY0 241 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 PHACTR2O75167 634 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 MAFO75444 373 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 PRPF4BQ13523 1007 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 NME8Q8N427 588 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 CSGALNACT2Q8N6G5 542 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 NR2E3Q9Y5X4 410 aa12.23□□□□□ -0.45
TNFAIP3-201ENST00000237289 IGSF9BQ9UPX0 1349 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 LOC285556D6RIA3 1793 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 CAPN2P17655 700 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 CYP2J2P51589 502 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 ECM1Q16610 540 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 ENGASEQ8NFI3 743 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 APOL6Q9BWW8 343 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 MRPL4Q9BYD3 311 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 ARVCFO00192 962 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 PRKCBP05771 671 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 NAMPTP43490 491 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 SOX10P56693 466 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 LAMTOR4Q0VGL1 99 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 GIT2Q14161 759 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 SLFN12LQ6IEE8 588 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 ABI1Q8IZP0 508 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 NMT1P30419 496 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 SMYD4Q8IYR2 804 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 MMRN2Q9H8L6 949 aa12.22□□□□□ -0.45
TNFAIP3-201ENST00000237289 A0A087X0B3 334 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZBBXA8MT70 800 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 SLC12A3P55017 1021 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 PAK2Q13177 524 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 FKBP15Q5T1M5 1219 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZBTB33Q86T24 672 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 TRIM5Q9C035 493 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 PRMT7Q9NVM4 692 aaPredicted RBP12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 CLDN3O15551 220 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 TREHO43280 583 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 PTPN11Q06124 597 aaPredicted RBP12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 SPAG1Q07617 926 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 KCNB1Q14721 858 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZNF333Q96JL9 665 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 OSMRQ99650 979 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 C16orf70Q9BSU1 422 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
TNFAIP3-201ENST00000237289 A0A087WZ62 844 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 AOPEPQ8N6M6 819 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 KATNBL1Q9H079 304 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 SMIM35A0A1B0GVV1 85 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 GPR182O15218 404 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 EDIL3O43854 480 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 EVI5O60447 810 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 SCP2P22307 547 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 DPYDQ12882 1025 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 NAALADL2Q58DX5 795 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 HSP90AA4PQ58FG1 418 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 C1orf186Q6ZWK4 172 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 GTF2IRD1Q9UHL9 959 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 GDAQ9Y2T3 454 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 TRPV2Q9Y5S1 764 aa12.21□□□□□ -0.46
TNFAIP3-201ENST00000237289 ZNF410Q86VK4 478 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 RPS6KC1Q96S38 1066 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 CAPN15O75808 1086 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 NPTX2P47972 431 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 MYL5Q02045 173 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 ADAM9Q13443 819 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 E2F4Q16254 413 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 ZNF568Q3ZCX4 644 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 SPOUT1Q5T280 376 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 ANKLE1Q8NAG6 615 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 PCYT2Q99447 389 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 CCDC94Q9BW85 323 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 UPF3AQ9H1J1 476 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 PCDHA2Q9Y5H9 948 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 KIAA0100Q14667 2235 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 CST5P28325 142 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms