RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 SMAP1Q8IYB5 467 aaPredicted RBP10.79□□□□□ -0.68
TTC1-201ENST00000231238 ADSSL1Q8N142 457 aa10.79□□□□□ -0.68
TTC1-201ENST00000231238 RDM1Q8NG50 284 aa10.79□□□□□ -0.68
TTC1-201ENST00000231238 ATP6V0A1Q93050 837 aa10.79□□□□□ -0.68
TTC1-201ENST00000231238 DHTKD1Q96HY7 919 aaPredicted RBP10.79□□□□□ -0.68
TTC1-201ENST00000231238 PDLIM2Q96JY6 352 aa10.79□□□□□ -0.68
TTC1-201ENST00000231238 IFNKQ9P0W0 207 aa10.79□□□□□ -0.68
TTC1-201ENST00000231238 SLC9A2Q9UBY0 812 aa10.79□□□□□ -0.68
TTC1-201ENST00000231238 NFASCO94856 1347 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 NPHP3-ACAD11A0A0J9YXS1 232 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 ASB14A6NK59 587 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
TTC1-201ENST00000231238 ATP9AO75110 1047 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 FGFR1OPO95684 399 aaKnown RBP10.78□□□□□ -0.68
TTC1-201ENST00000231238 SLC12A3P55017 1021 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 PSMC5P62195 406 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 SPAG1Q07617 926 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 NEDD9Q14511 834 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 NCAPHQ15003 741 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 TLR1Q15399 786 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 MYOCDQ8IZQ8 938 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 FAM133AQ8N9E0 248 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 PORCNQ9H237 461 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 MLXIPQ9HAP2 919 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 TBC1D7Q9P0N9 293 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 DYRK1BQ9Y463 629 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 COL4A3BPQ9Y5P4 624 aa10.78□□□□□ -0.68
TTC1-201ENST00000231238 A0A0G2JMZ2 1700 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 DHX15O43143 795 aaKnown RBP10.77□□□□□ -0.69
TTC1-201ENST00000231238 AP5Z1O43299 807 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 STRNO43815 780 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 COBLO75128 1261 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 ATP1A3P13637 1013 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 KCNA2P16389 499 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 GAP43P17677 238 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 PHKA2P46019 1235 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 INHBEP58166 350 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 SREBF2Q12772 1141 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 STK4Q13043 487 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 C4orf17Q53FE4 359 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 KCNV1Q6PIU1 500 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 STXBP4Q6ZWJ1 553 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 CYFIP1Q7L576 1253 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 OTUD6AQ7L8S5 288 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 SAPCD2Q86UD0 394 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 FAM114A1Q8IWE2 563 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 NOC3LQ8WTT2 800 aaKnown RBP10.77□□□□□ -0.69
TTC1-201ENST00000231238 P2RX5Q93086 422 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 HPS3Q969F9 1004 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 CTAGE1Q96RT6 745 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 XPO4Q9C0E2 1151 aaKnown RBP10.77□□□□□ -0.69
TTC1-201ENST00000231238 SAMSN1Q9NSI8 373 aaKnown RBP10.77□□□□□ -0.69
TTC1-201ENST00000231238 KCND2Q9NZV8 630 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 GABBR1Q9UBS5 961 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 MORF4L1Q9UBU8 362 aa10.77□□□□□ -0.69
TTC1-201ENST00000231238 NOP56O00567 594 aaKnown RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 LORP23490 312 aaPredicted RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 CCNE1P24864 410 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 ADORA2AP29274 412 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 CDC25BP30305 580 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 MAPK4P31152 587 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 YWHABP31946 246 aaKnown RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 ICAM3P32942 547 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 SMTNP53814 917 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 ACTR2P61160 394 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 CLDN10P78369 228 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 GIT2Q14161 759 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 FAM110CQ1W6H9 321 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 XKR9Q5GH70 373 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 TMEM214Q6NUQ4 689 aaKnown RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 SWSAP1Q6NVH7 229 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 PLEKHH3Q7Z736 793 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 GUF1Q8N442 669 aaKnown RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 MYCT1Q8N699 235 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 CSGALNACT2Q8N6G5 542 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 DNAJC19Q96DA6 116 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 REEP2Q9BRK0 252 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 RUSC1Q9BVN2 902 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 PPP1R12CQ9BZL4 782 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 MRPL44Q9H9J2 332 aaKnown RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 TIMMDC1Q9NPL8 285 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 CPA4Q9UI42 421 aa10.76□□□□□ -0.69
TTC1-201ENST00000231238 MAFBQ9Y5Q3 323 aaPredicted RBP10.76□□□□□ -0.69
TTC1-201ENST00000231238 LOC102724159A0A0B4J2E5 919 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 CDC14CA4D256 554 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 TMEM88BA6NKF7 163 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 NRDCO43847 1150 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 USO1O60763 962 aaKnown RBP10.75□□□□□ -0.69
TTC1-201ENST00000231238 GCNT3O95395 438 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 GGPS1O95749 300 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 CCNE2O96020 404 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 TGFB3P10600 412 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 PWP2Q15269 919 aaKnown RBP10.75□□□□□ -0.69
TTC1-201ENST00000231238 LRRC41Q15345 812 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 ARSHQ5FYA8 562 aa10.75□□□□□ -0.69
TTC1-201ENST00000231238 FAM160B1Q5W0V3 765 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms