RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ISCUQ9H1K1 167 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 BHMT2Q9H2M3 363 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 A1CFQ9NQ94 594 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 PICK1Q9NRD5 415 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 RGL1Q9NZL6 768 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 NR2E1Q9Y466 385 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 RASSF9O75901 435 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 GYS1P13807 737 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 HSPA9P38646 679 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 RWDD2BP57060 319 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 ITGB3BPQ13352 177 aaPredicted RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 EPHA7Q15375 998 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 GRIPAP1Q4V328 841 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 GKAP1Q5VSY0 366 aaPredicted RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 FAM228AQ86W67 206 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 WHAMMQ8TF30 809 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 LENG9Q96B70 501 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 RBM17Q96I25 401 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 OSGEPQ9NPF4 335 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 KCNQ5Q9NR82 932 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 TRAF3IP3Q9Y228 551 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 NOC2LQ9Y3T9 749 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 ATAD5Q96QE3 1844 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 ASTN1O14525 1302 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 DDX3XO00571 662 aaKnown RBP eCLIP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 DAPK3O43293 454 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 GFPT2O94808 682 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 HOXA13P31271 388 aaPredicted RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 COPB2P35606 906 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 EPM2AIP1Q7L775 607 aaPredicted RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 FRMD5Q7Z6J6 570 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 CD302Q8IX05 232 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 CCDC26Q8TAB7 109 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 PIGOQ8TEQ8 1089 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLC35C1Q96A29 364 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 OSBPL7Q9BZF2 842 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 GOPCQ9HD26 462 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 NOVA2Q9UNW9 492 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 PITPNM2Q9BZ72 1349 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 DCDC2CA8MYV0 355 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 H0YGN5 161 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 GCNT3O95395 438 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 MYZAPP0CAP1 466 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 PCK1P35558 622 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 POLE2P56282 527 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 USP4Q13107 963 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 PEX26Q7Z412 305 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 ADAT2Q7Z6V5 191 aaKnown RBP10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 KIF2BQ8N4N8 673 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 SYT2Q8N9I0 419 aaPredicted RBP10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 MDM1Q8TC05 714 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 U2AF1L4Q8WU68 220 aaKnown RBP10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 TMBIM4Q9HC24 238 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 PLCB1Q9NQ66 1216 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 GCNT4Q9P109 453 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 SWAP70Q9UH65 585 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 NFS1Q9Y697 457 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 CYP3A7-CYP3A51PA0A087WV96 503 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 GMNCA6NCL1 334 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 EML1O00423 815 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 KRIT1O00522 736 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 TTI1O43156 1089 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 EVI5O60447 810 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 BBOX1O75936 387 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 FAM107AO95990 144 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 NR3C1P04150 777 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 PYGLP06737 847 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 CYP3A7P24462 503 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 MXRA7P84157 204 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 ADCY2Q08462 1091 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 COG2Q14746 738 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 KRT71Q3SY84 523 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZC2HC1CQ53FD0 456 aaPredicted RBP10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 DAAM2Q86T65 1068 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 SIAH1Q8IUQ4 282 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 SEC16BQ96JE7 1060 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 ACTR5Q9H9F9 607 aaPredicted RBP10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 ATP6V0A4Q9HBG4 840 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 TRPC6Q9Y210 931 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 BCS1LQ9Y276 419 aa10.18□□□□□ -0.78
HLA-DOA-201ENST00000229829 RPA1P27694 616 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 CTNNA1P35221 906 aaKnown RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 TMCO4Q5TGY1 634 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLFN13Q68D06 897 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 CHADLQ6NUI6 762 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 C3orf20Q8ND61 904 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 LNX1Q8TBB1 728 aaPredicted RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 ACTRT1Q8TDG2 376 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 PRCCQ92733 491 aaPredicted RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 DPH5Q9H2P9 285 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 FBXL5Q9UKA1 691 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 DDTLA6NHG4 134 aaPredicted RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 BTNL10A8MVZ5 291 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 PGRMC1O00264 195 aaKnown RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 MSH4O15457 936 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms