RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 SGO2Q562F6 1265 aa14.66□□□□□ -0.06
RAB3D-201ENST00000222120 PPP1R16BQ96T49 567 aa14.66□□□□□ -0.06
RAB3D-201ENST00000222120 PLCD4Q9BRC7 762 aa14.66□□□□□ -0.06
RAB3D-201ENST00000222120 UNC45AQ9H3U1 944 aa14.66□□□□□ -0.06
RAB3D-201ENST00000222120 BCAS3Q9H6U6 928 aa14.66□□□□□ -0.06
RAB3D-201ENST00000222120 FEM1BQ9UK73 627 aa14.66□□□□□ -0.06
RAB3D-201ENST00000222120 ZBTB7AO95365 584 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 CRY2Q49AN0 593 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 PNMA8AQ86V59 439 aaPredicted RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 ATP6V0A1Q93050 837 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 STMN4Q9H169 189 aaPredicted RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 EHD4Q9H223 541 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 MARF1Q9Y4F3 1742 aaKnown RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 SPATA31A6Q5VVP1 1343 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 FOXN3O00409 490 aaPredicted RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 DKC1O60832 514 aaKnown RBP eCLIP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 ENTPD3O75355 529 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 MAGOHP61326 146 aaKnown RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 CYP4F22Q6NT55 531 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 NCAPG2Q86XI2 1143 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 RFFLQ8WZ73 363 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 TUFT1Q9NNX1 390 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 PLCB1Q9NQ66 1216 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 AGPAT3Q9NRZ7 376 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 RNF146Q9NTX7 359 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 APEX2Q9UBZ4 518 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 ANAPC7Q9UJX3 599 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 TISP43B9A030 160 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 CCDC188H7C350 402 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 MAP2K7O14733 419 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 MARK3P27448 753 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 CDK17Q00537 523 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 BFSP1Q12934 665 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 C2CD6Q53TS8 623 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 SNRNP48Q6IEG0 339 aaKnown RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 USP38Q8NB14 1042 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 BAP1Q92560 729 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 CBWD1Q9BRT8 395 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 NSRP1Q9H0G5 558 aaKnown RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 AZI2Q9H6S1 392 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 VIPAS39Q9H9C1 493 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 MLXIPLQ9NP71 852 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 CNOT8Q9UFF9 292 aaKnown RBP14.65□□□□□ -0.06
RAB3D-201ENST00000222120 FAM169AQ9Y6X4 670 aa14.65□□□□□ -0.06
RAB3D-201ENST00000222120 GRID2IPA4D2P6 1211 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 A6NNZ2 444 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 YWHABP31946 246 aaKnown RBP14.64□□□□□ -0.07
RAB3D-201ENST00000222120 SEC24CP53992 1094 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 MTMR2Q13614 643 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 TUBB8Q3ZCM7 444 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 STK33Q9BYT3 514 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 NFIBO00712 420 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 FAM153BP0C7A2 387 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 HOXA7P31268 230 aaPredicted RBP14.64□□□□□ -0.07
RAB3D-201ENST00000222120 IGBP1P78318 339 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 GPC5P78333 572 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 FAM153CQ494X1 144 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 CASKIN2Q8WXE0 1202 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 FAM153AQ9UHL3 310 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 SALL4Q9UJQ4 1053 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 CD2APQ9Y5K6 639 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 ITGA4P13612 1032 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 KCNJ1P48048 391 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 IRAK1P51617 712 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 GABPAQ06546 454 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 DACT2Q5SW24 774 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 CACNA2D3Q8IZS8 1091 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 PI4K2AQ9BTU6 479 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 THAP2Q9H0W7 228 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 NKIRAS1Q9NYS0 192 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 SEL1LQ9UBV2 794 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 ZNF148Q9UQR1 794 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 IKBKGQ9Y6K9 419 aa14.64□□□□□ -0.07
RAB3D-201ENST00000222120 M0R2N6 131 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 THAP12O43422 761 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 SLC12A3P55017 1021 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 CUL1Q13616 776 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 BAATQ14032 418 aaPredicted RBP14.63□□□□□ -0.07
RAB3D-201ENST00000222120 ZKSCAN8Q15776 578 aaPredicted RBP14.63□□□□□ -0.07
RAB3D-201ENST00000222120 RTKN2Q8IZC4 609 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 SLC7A3Q8WY07 619 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 WRNIP1Q96S55 665 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 AGPAT1Q99943 283 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 HSPBP1Q9NZL4 362 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 ZNF142P52746 1687 aaPredicted RBP14.63□□□□□ -0.07
RAB3D-201ENST00000222120 WDR64B1ANS9 1081 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 NUP85Q9BW27 656 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 GOLGA8SH3BPF8 625 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 ATP2A1O14983 1001 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 SRGAP2CP0DJJ0 459 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 KRT15P19012 456 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 BRDTQ58F21 947 aaPredicted RBP14.63□□□□□ -0.07
RAB3D-201ENST00000222120 ARSHQ5FYA8 562 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 TPCN2Q8NHX9 752 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 FAM151AQ8WW52 585 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 C1orf54Q8WWF1 131 aa14.63□□□□□ -0.07
RAB3D-201ENST00000222120 HAUS1Q96CS2 278 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms