RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 VAMP7P51809 220 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 GRAMD1BQ3KR37 738 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 PPP1R18Q6NYC8 613 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 PRDM15P57071 1507 aaPredicted RBP19.07■□□□□ 0.64
EXTL3-201ENST00000220562 CDC27P30260 824 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 ZNF211Q13398 564 aaPredicted RBP19.07■□□□□ 0.64
EXTL3-201ENST00000220562 MAPK6Q16659 721 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 BEND6Q5SZJ8 279 aaPredicted RBP19.07■□□□□ 0.64
EXTL3-201ENST00000220562 RASSF3Q86WH2 238 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 TMEM35BQ8NCS4 154 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 M0QYV0 167 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 PAPOLAP51003 745 aaKnown RBP19.07■□□□□ 0.64
EXTL3-201ENST00000220562 KNOP1Q1ED39 458 aaKnown RBP19.07■□□□□ 0.64
EXTL3-201ENST00000220562 NCLNQ969V3 563 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 CEP95Q96GE4 821 aa19.07■□□□□ 0.64
EXTL3-201ENST00000220562 ZRANB2O95218 330 aaKnown RBP eCLIP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 POLE2P56282 527 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 SNRNP48Q6IEG0 339 aaKnown RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 NFRKBQ6P4R8 1299 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 VPS39Q96JC1 886 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 FAM167AQ96KS9 214 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 C11orf70Q9BRQ4 267 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 TDRD3Q9H7E2 651 aaKnown RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 TTC7AQ9ULT0 858 aaPredicted RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 ABT1Q9ULW3 272 aaKnown RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 F8W8V4 182 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 SNX2O60749 519 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 PHKA2P46019 1235 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 SLC44A5Q8NCS7 719 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 CALR3Q96L12 384 aaKnown RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 TMEM60Q9H2L4 133 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 SUDS3Q9H7L9 328 aaPredicted RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 SLC13A4Q9UKG4 626 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 SPAG7O75391 227 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 EEF1DP29692 281 aaKnown RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 DHX40Q8IX18 779 aaKnown RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 MCPH1Q8NEM0 835 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 RNF25Q96BH1 459 aaPredicted RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 ZBTB18Q99592 522 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 GTSE1Q9NYZ3 720 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 LCMT1Q9UIC8 334 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 DENND3A2RUS2 1198 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 MMP10P09238 476 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 RCSD1Q6JBY9 416 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 UTYO14607 1347 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 ARHGDIAP52565 204 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 TXNRD1Q16881 649 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 FAM47EQ6ZV65 393 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 TTC13Q8NBP0 860 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 CPDO75976 1380 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 POTEFA5A3E0 1075 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 IGKV5-2P06315 115 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 POTEIP0CG38 1075 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 POTEGQ6S5H5 508 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 POTEEQ6S8J3 1075 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 MB21D2Q8IYB1 491 aaPredicted RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 FMR1NBQ8N0W7 255 aaPredicted RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 ABTB1Q969K4 478 aaPredicted RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 MXD3Q9BW11 206 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 ZFP69BQ9UJL9 534 aa19.06■□□□□ 0.64
EXTL3-201ENST00000220562 APOBEC2Q9Y235 224 aaKnown RBP19.06■□□□□ 0.64
EXTL3-201ENST00000220562 NCAPD2Q15021 1401 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 NT5C2P49902 561 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 CLEC4GQ6UXB4 293 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 RHPN2Q8IUC4 686 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 ADGRF4Q8IZF3 695 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 NDUFAF2Q8N183 169 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 MORC4Q8TE76 937 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 TBC1D22BQ9NU19 505 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 TSPOAP1O95153 1857 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 VPS11Q9H270 941 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 SMYD3Q9H7B4 428 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 SNAP23O00161 211 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 OSBPL9Q96SU4 736 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 STRIP2Q9ULQ0 834 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 GYG2O15488 501 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 KLHL38Q2WGJ6 581 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 WDR75Q8IWA0 830 aaKnown RBP19.05■□□□□ 0.64
EXTL3-201ENST00000220562 SYNE4Q8N205 404 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 SSTR3P32745 418 aaPredicted RBP19.05■□□□□ 0.64
EXTL3-201ENST00000220562 MDM2Q00987 491 aaPredicted RBP19.05■□□□□ 0.64
EXTL3-201ENST00000220562 SPATS2LQ9NUQ6 558 aaKnown RBP19.05■□□□□ 0.64
EXTL3-201ENST00000220562 POLIQ9UNA4 740 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 ZHX2Q9Y6X8 837 aa19.05■□□□□ 0.64
EXTL3-201ENST00000220562 WDR19Q8NEZ3 1342 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 H3BRJ5 948 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 HUS1O60921 280 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 GNA15P30679 374 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 HADHAP40939 763 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 COPS2P61201 443 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 TRIM59Q8IWR1 403 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 SCN4BQ8IWT1 228 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 CEP19Q96LK0 163 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 POLR3FQ9H1D9 316 aaPredicted RBP19.04■□□□□ 0.64
EXTL3-201ENST00000220562 HOXC10Q9NYD6 342 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 MAGOHP61326 146 aaKnown RBP19.04■□□□□ 0.64
EXTL3-201ENST00000220562 CAV1Q03135 178 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 KIAA1755Q5JYT7 1200 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 SWSAP1Q6NVH7 229 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 PDCD6IPQ8WUM4 868 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms