RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 DCCP43146 1447 aa8.56□□□□□ -1.04
SCG3-201ENST00000220478 DDX3YO15523 660 aaKnown RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 PDE8BO95263 885 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 GH1P01241 217 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 AFPP02771 609 aaKnown RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 NT5DC3Q86UY8 548 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 ECHDC2Q86YB7 292 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 FAM114A1Q8IWE2 563 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 SPATA5Q8NB90 893 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 B4GALNT2Q8NHY0 566 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 ANKRD27Q96NW4 1050 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 TMEM109Q9BVC6 243 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 RXFP1Q9HBX9 757 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 AVENQ9NQS1 362 aaPredicted RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 SLAIN2Q9P270 581 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 ZBTB12Q9Y330 459 aaPredicted RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 MYMKA6NI61 221 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 PGRMC1O00264 195 aaKnown RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 HIP1RO75146 1068 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 LUC7L3O95232 432 aaKnown RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 SPATA31D3P0C874 917 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 TGFB3P10600 412 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 ALDH3A1P30838 453 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 EIF3BP55884 814 aaKnown RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 PTK2Q05397 1052 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 SLC29A2Q14542 456 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 SEPT2Q15019 361 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 ZC2HC1CQ53FD0 456 aaPredicted RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 CCDC178Q5BJE1 867 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 SPATA31D4Q6ZUB0 917 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 TRIM74Q86UV6 250 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 TRIM73Q86UV7 250 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 SLC7A6OSQ96CW6 309 aaPredicted RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 C8orf48Q96LL4 319 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 NUCKS1Q9H1E3 243 aaKnown RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 SEMA4AQ9H3S1 761 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 SLITRK6Q9H5Y7 841 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 TTC7AQ9ULT0 858 aaPredicted RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 STK38LQ9Y2H1 464 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 PHLPP1O60346 1717 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 CEP104O60308 925 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 LGR5O75473 907 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 UNC5CO95185 931 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 ACADSP16219 412 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 CALB2P22676 271 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 MAN1A1P33908 653 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 IFNAR2P48551 515 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 PEX5P50542 639 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 RPS6KA1Q15418 735 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 METTL24Q5JXM2 366 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 COL23A1Q86Y22 540 aaPredicted RBP8.55□□□□□ -1.04
SCG3-201ENST00000220478 KLHL29Q96CT2 875 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 CASS4Q9NQ75 786 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 CYP39A1Q9NYL5 469 aa8.55□□□□□ -1.04
SCG3-201ENST00000220478 PDLIM1O00151 329 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 KIAA0391O15091 583 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 CNGA1P29973 690 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 SKIV2L2P42285 1042 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 PTGIRP43119 386 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 ZRSR2Q15696 482 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 CCDC38Q502W7 563 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 TRIM68Q6AZZ1 485 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 CCDC84Q86UT8 332 aaPredicted RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 FAM133AQ8N9E0 248 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 MIGA1Q8NAN2 632 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 FAM13CQ8NE31 585 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 FBXO25Q8TCJ0 367 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.04
SCG3-201ENST00000220478 DCAF5Q96JK2 942 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 FMO2Q99518 471 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 INTS9Q9NV88 658 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 INTUQ9ULD6 942 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 TBC1D30Q9Y2I9 924 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 MROH7Q68CQ1 1323 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 ANKRD63C9JTQ0 380 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 CCDC188H7C350 402 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 IFRD1O00458 451 aaPredicted RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 KRIT1O00522 736 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 ZSCAN9O15535 394 aaPredicted RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 SMIM24O75264 130 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 BAG3O95817 575 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 PDHA1P08559 390 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 XBP1P17861 261 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 TAF1P21675 1872 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 PTDSS1P48651 473 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 PMS2P54278 862 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 PTENP60484 403 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 GRB10Q13322 594 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
SCG3-201ENST00000220478 MFSD10Q14728 455 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 LRRC14Q15048 493 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 SLC9C1Q4G0N8 1177 aa8.54□□□□□ -1.04
SCG3-201ENST00000220478 SFMBT2Q5VUG0 894 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms