RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 YWHAEP62258 255 aaKnown RBP11.77□□□□□ -0.53
USP31-201ENST00000219689 THEMIS2Q5TEJ8 643 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 BLIDQ8IZY5 108 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 NSL1Q96IY1 281 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 AP4S1Q9Y587 144 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 GOLGA8JA6NMD2 632 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 GJA10Q969M2 543 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 ATP6V1E2Q96A05 226 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 PPARAQ07869 468 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 ABCC12Q96J65 1359 aa11.77□□□□□ -0.53
USP31-201ENST00000219689 PFDN6O15212 129 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 NOA1Q8NC60 698 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 MRPL1Q9BYD6 325 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 MED23Q9ULK4 1368 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 LGALS16A8MUM7 142 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 PREPLQ4J6C6 727 aaPredicted RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 MMS19Q96T76 1030 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 FUT8Q9BYC5 575 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 CCDC134Q9H6E4 229 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 NOL6Q9H6R4 1146 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 KIF24Q5T7B8 1368 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 NR2F2P24468 414 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 OR8H2Q8N162 312 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 OR9Q1Q8NGQ5 310 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 CIITAP33076 1130 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 SMAD1Q15797 465 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 SNX30Q5VWJ9 437 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 TMEM110Q86TL2 294 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 UBE2TQ9NPD8 197 aaPredicted RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 ZNF18P17022 549 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 FAF2Q96CS3 445 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 AMACRQ9UHK6 382 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 RYBPQ8N488 228 aaPredicted RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 DNAAF3Q8N9W5 541 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 GLMNQ92990 594 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 CLK1P49759 484 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 DNAL1Q4LDG9 190 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 FAM102BQ5T8I3 360 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 PAIP1Q9H074 479 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 RPAP3Q9H6T3 665 aaPredicted RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 CDV3Q9UKY7 258 aaKnown RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 FOXO3O43524 673 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 DTNAQ9Y4J8 743 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 SMCO2A6NFE2 343 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 TCN1P20061 433 aaPredicted RBP11.76□□□□□ -0.53
USP31-201ENST00000219689 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 RAD21L1Q9H4I0 556 aa11.76□□□□□ -0.53
USP31-201ENST00000219689 A6NJR5 290 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 CCDC127Q96BQ5 260 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 CSRNP1Q96S65 589 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 ROR2Q01974 943 aaKnown RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 CAV1Q03135 178 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 TSTA3Q13630 321 aaPredicted RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 R3HDM1Q15032 1099 aaKnown RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 HSPH1Q92598 858 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 SNF8Q96H20 258 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 TEX33O43247 280 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 NSMFQ6X4W1 530 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 BBS2Q9BXC9 721 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 EURLQ9NYK6 297 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 KDM5DQ9BY66 1539 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 CEP250Q9BV73 2442 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 ARL4CP56559 192 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 INPP5AQ14642 412 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 ABCA1O95477 2261 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 B2RBV5 119 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 AIM2O14862 343 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 ENO3P13929 434 aaPredicted RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 PSMC3P17980 439 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 CASP1P29466 404 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 GRIN1Q05586 938 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 CCDC81Q6ZN84 652 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 LINS1Q8NG48 757 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 ARHGEF17Q96PE2 2063 aaPredicted RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 F8VZ95 297 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 TRIM49P0CI25 452 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 TRIM49CP0CI26 452 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 C21orf59P57076 290 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 C4orf50Q6ZRC1 276 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 RIOK1Q9BRS2 568 aaKnown RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 KPNA4O00629 521 aaPredicted RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 KDM7AQ6ZMT4 941 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 TRPC7Q9HCX4 862 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 SRGAP2BP0DMP2 458 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 UTS2BQ765I0 119 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 NUP93Q8N1F7 819 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
USP31-201ENST00000219689 CDC26Q8NHZ8 85 aa11.75□□□□□ -0.53
USP31-201ENST00000219689 PHF21AQ96BD5 680 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms