RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PGM2Q96G03 612 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 PHF12Q96QT6 1004 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 IWS1Q96ST2 819 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 GYG2O15488 501 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 PDE6AP16499 860 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 PDE1CQ14123 709 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-201ENST00000216877 EXOC3L4Q17RC7 722 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 PHLDB3Q6NSJ2 640 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 DSTYKQ6XUX3 929 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 ST13P4Q8IZP2 240 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-201ENST00000216877 ERP44Q9BS26 406 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 SLITRK6Q9H5Y7 841 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 ARHGEF38Q9NXL2 777 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 IQSEC3Q9UPP2 1182 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-201ENST00000216877 UTYO14607 1347 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 MARCH6O60337 910 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 BTKQ06187 659 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 AUHQ13825 339 aaKnown RBP15.74■□□□□ 0.11
PTPRA-201ENST00000216877 TRIP13Q15645 432 aaPredicted RBP15.74■□□□□ 0.11
PTPRA-201ENST00000216877 SPOCK2Q92563 424 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 SLCO1B3Q9NPD5 702 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 TMCO1Q9UM00 188 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 SIK3Q9Y2K2 1263 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 SOS2Q07890 1332 aaPredicted RBP15.74■□□□□ 0.11
PTPRA-201ENST00000216877 SSU72P8A0A1W2PR75 194 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 CNNM4Q6P4Q7 775 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 LDHAL6AQ6ZMR3 332 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 PIH1D3Q9NQM4 214 aaKnown RBP15.74■□□□□ 0.11
PTPRA-201ENST00000216877 ZFP69BQ9UJL9 534 aa15.74■□□□□ 0.11
PTPRA-201ENST00000216877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.73■□□□□ 0.11
PTPRA-201ENST00000216877 CPA2P48052 419 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 NEK3P51956 506 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 THOC5Q13769 683 aaKnown RBP15.73■□□□□ 0.11
PTPRA-201ENST00000216877 CCDC92Q53HC0 331 aaPredicted RBP15.73■□□□□ 0.11
PTPRA-201ENST00000216877 KIAA1755Q5JYT7 1200 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 OLFML1Q6UWY5 402 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 IZUMO2Q6UXV1 221 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 TMTC2Q8N394 836 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 TBC1D16Q8TBP0 767 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 PTPRN2Q92932 1015 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 SPATA16Q9BXB7 569 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 SEMA6BQ9H3T3 888 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 NRAPQ86VF7 1730 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 LTBP4Q8N2S1 1624 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 MAGEB3O15480 346 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 RHOBTB3O94955 611 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 ACTN1P12814 892 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 RASA1P20936 1047 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 ADD2P35612 726 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 LONP1P36776 959 aaKnown RBP15.73■□□□□ 0.11
PTPRA-201ENST00000216877 MCAMP43121 646 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 KCNJ1P48048 391 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 ASRGL1Q7L266 308 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 COL23A1Q86Y22 540 aaPredicted RBP15.73■□□□□ 0.11
PTPRA-201ENST00000216877 BAP1Q92560 729 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 ESR2Q92731 530 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 TUBGCP5Q96RT8 1024 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 RNF26Q9BY78 433 aaPredicted RBP15.73■□□□□ 0.11
PTPRA-201ENST00000216877 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 H2AFZP0C0S5 128 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 LETM2Q2VYF4 491 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 TAF1BQ53T94 588 aaPredicted RBP15.73■□□□□ 0.11
PTPRA-201ENST00000216877 H2AFVQ71UI9 128 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 VPS36Q86VN1 386 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 JAMLQ86YT9 394 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 AGBL1Q96MI9 1066 aa15.73■□□□□ 0.11
PTPRA-201ENST00000216877 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 ANKRD62A6NC57 917 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 O00370 1275 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 LYNP07948 512 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
PTPRA-201ENST00000216877 VEGFAP15692 232 aaPredicted RBP15.72■□□□□ 0.11
PTPRA-201ENST00000216877 EIF4BP23588 611 aaKnown RBP15.72■□□□□ 0.11
PTPRA-201ENST00000216877 CCNG1P51959 295 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 AMPD3Q01432 767 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 FIGNQ5HY92 759 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 C18orf8Q96DM3 657 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 UBN1Q9NPG3 1134 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 PASKQ96RG2 1323 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 TLR2O60603 784 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 YY1P25490 414 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 TECP42680 631 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 ADARP55265 1226 aaKnown RBP15.72■□□□□ 0.11
PTPRA-201ENST00000216877 IL9RQ01113 521 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 MGAT5Q09328 741 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 PDIA6Q15084 440 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 KCTD21Q4G0X4 260 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 RBM26Q5T8P6 1007 aaKnown RBP15.72■□□□□ 0.11
PTPRA-201ENST00000216877 GRAMD4Q6IC98 578 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 AADACL2Q6P093 401 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 CCDC174Q6PII3 467 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 TMEM60Q9H2L4 133 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 ASIC3Q9UHC3 531 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 ZNF180Q9UJW8 692 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 MYH6P13533 1939 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 A0A0G2JND7 137 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 E7ENQ6 273 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms