RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 MFSD5Q6N075 450 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 CCDC65Q8IXS2 484 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 PAGE5Q96GU1 130 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 C7orf25Q9BPX7 421 aa22.33■■□□□ 1.16
RHBDD3-201ENST00000216085 NPHP3-ACAD11A0A0J9YXS1 232 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 MBD3O95983 291 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 PLS3P13797 630 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 IDEP14735 1019 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 GAP43P17677 238 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 MCM4P33991 863 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 CACNB1Q02641 598 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 MLLT1Q03111 559 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 POU5F1BQ06416 359 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 MGAT3Q09327 533 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 ZBTB8OSQ8IWT0 167 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 DEPTORQ8TB45 409 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 ASAP3Q8TDY4 903 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 CCDC47Q96A33 483 aaKnown RBP22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 OSMRQ99650 979 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 WNT8AQ9H1J5 351 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 C2orf40Q9H1Z8 148 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 DACT1Q9NYF0 836 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 ZMYND8Q9ULU4 1186 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 SQORQ9Y6N5 450 aa22.32■■□□□ 1.16
RHBDD3-201ENST00000216085 TANC1Q9C0D5 1861 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 UMODL1Q5DID0 1318 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 PHLPP2Q6ZVD8 1323 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 H0YCG3 227 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 GPR32O75388 356 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 CHRNA1P02708 482 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 CAPSQ13938 189 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 CNNM4Q6P4Q7 775 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 MYCT1Q8N699 235 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 SLC17A8Q8NDX2 589 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 SEL1LQ9UBV2 794 aa22.31■■□□□ 1.16
RHBDD3-201ENST00000216085 A0A087WZ62 844 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 GTPBP6O43824 516 aaPredicted RBP22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 SYN1P17600 705 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 SCP2P22307 547 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 PEX3P56589 373 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 MAPK7Q13164 816 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 SRGAP1Q7Z6B7 1085 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 KSR1Q8IVT5 923 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 DAW1Q8N136 415 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 FDXACB1Q9BRP7 624 aaPredicted RBP22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 ADAMTS10Q9H324 1103 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 CCDC169A6NNP5 214 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 SFPQP23246 707 aaKnown RBP eCLIP22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 EIF4BP23588 611 aaKnown RBP22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 ABCD1P33897 745 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 ZNF131P52739 623 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 POSTNQ15063 836 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 RPUSD2Q8IZ73 545 aaKnown RBP22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 SCLYQ96I15 445 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 NFKBIZQ9BYH8 718 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 KMT5AQ9NQR1 393 aa22.3■■□□□ 1.16
RHBDD3-201ENST00000216085 PFKMP08237 780 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 EFNA5P52803 228 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 FPGSQ05932 587 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 PPIGQ13427 754 aaKnown RBP eCLIP22.29■■□□□ 1.163e-6■□□□□ 10.9
RHBDD3-201ENST00000216085 PCBP1Q15365 356 aaKnown RBP eCLIP22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 TSHZ1Q6ZSZ6 1077 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 FAM178BQ8IXR5 827 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 ELOA2Q8IYF1 753 aaPredicted RBP22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 SPIRE2Q8WWL2 714 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 DNAJC19Q96DA6 116 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 ZNF668Q96K58 619 aaPredicted RBP22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 BLZF1Q9H2G9 400 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 POLD4Q9HCU8 107 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 PANK4Q9NVE7 773 aa22.29■■□□□ 1.16
RHBDD3-201ENST00000216085 SFI1A8K8P3 1242 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 RPS6KA5O75582 802 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 GHRP10912 638 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 DARSP14868 501 aaKnown RBP22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 PTENP60484 403 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 PAK2Q13177 524 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 FBXO47Q5MNV8 452 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 TRAF7Q6Q0C0 670 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 FAM43BQ6ZT52 329 aaPredicted RBP22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 GRAMD1CQ8IYS0 662 aa22.28■■□□□ 1.16
RHBDD3-201ENST00000216085 PVALEFA0A1B0GWK0 134 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 GPR182O15218 404 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 TRAK2O60296 914 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 SMC2O95347 1197 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 NPTX2P47972 431 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 NCBP1Q09161 790 aaKnown RBP22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 CUL4BQ13620 913 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 HERC4Q5GLZ8 1057 aaPredicted RBP22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 UNC13DQ70J99 1090 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 IFNLR1Q8IU57 520 aaPredicted RBP22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 BSNDQ8WZ55 320 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 BADQ92934 168 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 IFT122Q9HBG6 1241 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 MYH11P35749 1972 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 FRMD3A2A2Y4 597 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 INO80B-WBP1J3KQ70 363 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 ITGB8P26012 769 aa22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 CDCA2Q69YH5 1023 aaPredicted RBP22.27■■□□□ 1.16
RHBDD3-201ENST00000216085 APBB2Q92870 758 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms