RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 C11orf70Q9BRQ4 267 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 UBE4BO95155 1302 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 POTEB3A0JP26 581 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 POTECB2RU33 542 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 USP17L10C9JJH3 530 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 EEF1B2P24534 225 aaKnown RBP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 POTEBQ6S5H4 581 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 BANK1Q8NDB2 785 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 GPR101Q96P66 508 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 FAM213AQ9BRX8 229 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 TMEM60Q9H2L4 133 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 PPARGC1AQ9UBK2 798 aaKnown RBP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 PFASO15067 1338 aa14.48□□□□□ -0.09
SF3A1-201ENST00000215793 ZNF335Q9H4Z2 1342 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-201ENST00000215793 CTIFO43310 598 aaKnown RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 CACNB3P54284 484 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 YWHAHQ04917 246 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 CC2D1AQ6P1N0 951 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 TRIM72Q6ZMU5 477 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 BEST2Q8NFU1 509 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 ZNF564Q8TBZ8 553 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 DYDC2Q96IM9 177 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 HEMGNQ9BXL5 484 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 MAGEB5Q9BZ81 275 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 ADGRG1Q9Y653 693 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 A0A0G2JND7 137 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 SLC16A4O15374 487 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 CASP1P29466 404 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 USP11P51784 963 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 PDCLQ13371 301 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 SEPT12Q8IYM1 358 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 GOLPH3LQ9H4A5 285 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 SUCLA2Q9P2R7 463 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 GFPT1Q06210 699 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 NBPF9Q3BBW0 867 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 HP1BP3Q5SSJ5 553 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 LRRC31Q6UY01 552 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 TBC1D1Q86TI0 1168 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 TDRD3Q9H7E2 651 aaKnown RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 RNF146Q9NTX7 359 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 SLC13A4Q9UKG4 626 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 SPATA31A3Q5VYP0 1347 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 UBN2Q6ZU65 1347 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 FAM187AA6NFU0 413 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 ORC4O43929 436 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 MYBL1P10243 752 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 PYGBP11216 843 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 GRAMD1BQ3KR37 738 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 SLC27A3Q5K4L6 730 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 SNRNP48Q6IEG0 339 aaKnown RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 OSBPL9Q96SU4 736 aa14.47□□□□□ -0.09
SF3A1-201ENST00000215793 NOP53Q9NZM5 478 aaKnown RBP14.47□□□□□ -0.09
SF3A1-201ENST00000215793 VGLL3A8MV65 326 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 PFDN1O60925 122 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 STAT3P40763 770 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 TSGA10IPQ3SY00 556 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 MTRQ99707 1265 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.46□□□□□ -0.092e-12■□□□□ 8.5
SF3A1-201ENST00000215793 F5H6K3 240 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 GYG2O15488 501 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 SRGAP2O75044 1071 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 GPC3P51654 580 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 PSMC5P62195 406 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 CDR2Q01850 454 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 KLRC3Q07444 240 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 DRAP1Q14919 205 aaPredicted RBP14.46□□□□□ -0.09
SF3A1-201ENST00000215793 EPM2AIP1Q7L775 607 aaPredicted RBP14.46□□□□□ -0.09
SF3A1-201ENST00000215793 NEDD1Q8NHV4 660 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 PIM2Q9P1W9 311 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 IP6K2Q9UHH9 426 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 TTC26A0AVF1 554 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 C21orf2O43822 256 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 SMARCA1P28370 1054 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 CDC27P30260 824 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 CPVLQ9H3G5 476 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 SLITRK6Q9H5Y7 841 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 RAVER2Q9HCJ3 691 aaKnown RBP14.46□□□□□ -0.09
SF3A1-201ENST00000215793 HEY1Q9Y5J3 304 aa14.46□□□□□ -0.09
SF3A1-201ENST00000215793 FRMD3A2A2Y4 597 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 SPAG7O75391 227 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 QRICH1Q2TAL8 776 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 SLC10A5Q5PT55 438 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 ACAD11Q709F0 780 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 ISCA1Q9BUE6 129 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 FSD1LQ9BXM9 530 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 MRPL40Q9NQ50 206 aaKnown RBP14.46□□□□□ -0.1
SF3A1-201ENST00000215793 ZHX2Q9Y6X8 837 aa14.46□□□□□ -0.1
SF3A1-201ENST00000215793 GSG1L2A8MUP6 293 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 TADA3O75528 432 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 IFNA8P32881 189 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 RECQLP46063 649 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 AP3M2P53677 418 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 PMS2P54278 862 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 ATP2C1P98194 919 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-201ENST00000215793 SLC44A5Q8NCS7 719 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 ZNF302Q9NR11 478 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 TSPY1Q01534 308 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 TERF2Q15554 542 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 RHOT1Q8IXI2 618 aa14.45□□□□□ -0.1
SF3A1-201ENST00000215793 NUP85Q9BW27 656 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms