RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 DDX3XO00571 662 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTNS-201ENST00000046640 PPP1R12BO60237 982 aaPredicted RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 EVI5O60447 810 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 ICAM1P05362 532 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 PRLRP16471 622 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 PTGER2P43116 358 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 SF3A3Q12874 501 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTNS-201ENST00000046640 TRAF1Q13077 416 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 SPP2Q13103 211 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 DRAP1Q14919 205 aaPredicted RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 MEI1Q5TIA1 1274 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 PLA2G4FQ68DD2 849 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 PRPF38AQ8NAV1 312 aaKnown RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 CASKIN2Q8WXE0 1202 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 CLEC4DQ8WXI8 215 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 KAT2BQ92831 832 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 BORCS6Q96GS4 357 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 CHORDC1Q9UHD1 332 aaPredicted RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 GJA3Q9Y6H8 435 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 ZNF233A6NK53 670 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 CEP104O60308 925 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 NPEPPSP55786 919 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 SOX10P56693 466 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 RPS6P62753 249 aaKnown RBP14.27□□□□□ -0.12
CTNS-201ENST00000046640 MTMR1Q13613 665 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 UGCGQ16739 394 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 OSGEPQ9NPF4 335 aa14.27□□□□□ -0.12
CTNS-201ENST00000046640 CTDP1Q9Y5B0 961 aaPredicted RBP14.27□□□□□ -0.12
CTNS-201ENST00000046640 ZNF646O15015 1829 aaPredicted RBP14.27□□□□□ -0.12
CTNS-201ENST00000046640 FRMPD4Q14CM0 1322 aa14.27□□□□□ -0.13
CTNS-201ENST00000046640 A0A087WUV0 522 aaPredicted RBP14.27□□□□□ -0.13
CTNS-201ENST00000046640 BACH1O14867 736 aa14.27□□□□□ -0.13
CTNS-201ENST00000046640 SLC16A3O15427 465 aaKnown RBP14.27□□□□□ -0.13
CTNS-201ENST00000046640 USP8P40818 1118 aa14.27□□□□□ -0.13
CTNS-201ENST00000046640 MAPK7Q13164 816 aa14.27□□□□□ -0.13
CTNS-201ENST00000046640 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
CTNS-201ENST00000046640 ICE2Q659A1 982 aa14.27□□□□□ -0.13
CTNS-201ENST00000046640 EMBQ6PCB8 327 aa14.27□□□□□ -0.13
CTNS-201ENST00000046640 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 RAD51CO43502 376 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 GCLMP48507 274 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 RPS6KA1Q15418 735 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 CIAPIN1Q6FI81 312 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 PALB2Q86YC2 1186 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 JDP2Q8WYK2 163 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 TAF4BQ92750 862 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 PCDHGC5Q9Y5F6 944 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTNS-201ENST00000046640 DHX15O43143 795 aaKnown RBP14.26□□□□□ -0.13
CTNS-201ENST00000046640 IBSPP21815 317 aaPredicted RBP14.26□□□□□ -0.13
CTNS-201ENST00000046640 STAT1P42224 750 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 SETQ01105 290 aaPredicted RBP14.26□□□□□ -0.13
CTNS-201ENST00000046640 CEP85LQ5SZL2 805 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 RNF187Q5TA31 235 aaPredicted RBP14.26□□□□□ -0.13
CTNS-201ENST00000046640 ADAT2Q7Z6V5 191 aaKnown RBP14.26□□□□□ -0.13
CTNS-201ENST00000046640 SYTL5Q8TDW5 730 aaPredicted RBP14.26□□□□□ -0.13
CTNS-201ENST00000046640 ZKSCAN4Q969J2 545 aaPredicted RBP14.26□□□□□ -0.13
CTNS-201ENST00000046640 FAM84AQ96KN4 292 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 SH3GL2Q99962 352 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 TAS2R14Q9NYV8 317 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 RIPK3Q9Y572 518 aa14.26□□□□□ -0.13
CTNS-201ENST00000046640 H0YHG0 523 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 SLC16A4O15374 487 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 HSD17B4P51659 736 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 PEX3P56589 373 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 JAM2P57087 298 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 DAAM2Q86T65 1068 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 FAM83AQ86UY5 434 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 LNX1Q8TBB1 728 aaPredicted RBP14.25□□□□□ -0.13
CTNS-201ENST00000046640 ACP6Q9NPH0 428 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 PPANQ9NQ55 473 aaKnown RBP14.25□□□□□ -0.13
CTNS-201ENST00000046640 PGAP2Q9UHJ9 254 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 TCEAL9Q9UHQ7 104 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 CAPN7Q9Y6W3 813 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 F8VZ95 297 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 TBC1D12O60347 775 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 H2AFZP0C0S5 128 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 GALCP54803 685 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 MYL7Q01449 175 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 PRKG1Q13976 671 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 FAM102BQ5T8I3 360 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 NBPF12Q5TAG4 269 aaPredicted RBP14.25□□□□□ -0.13
CTNS-201ENST00000046640 ALS2CLQ60I27 953 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 PHLDB3Q6NSJ2 640 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 ARHGAP27Q6ZUM4 889 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 H2AFVQ71UI9 128 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 AGBL3Q8NEM8 1001 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 RMDN3Q96TC7 470 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 INTS2Q9H0H0 1204 aaKnown RBP14.25□□□□□ -0.13
CTNS-201ENST00000046640 SYNPO2Q9UMS6 1093 aa14.25□□□□□ -0.13
CTNS-201ENST00000046640 P4HBP07237 508 aaKnown RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 RARRES1P49788 294 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 ZNF131P52739 623 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 PAK2Q13177 524 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 NAA35Q5VZE5 725 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms