RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 NLRX1Q86UT6 975 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 PBKQ96KB5 322 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 CFAP73A6NFT4 308 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 RHOBTB3O94955 611 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 PDHBP11177 359 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 BMP3P12645 472 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 HOXA13P31271 388 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 MAGOHP61326 146 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 KCNH2Q12809 1159 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 SWT1Q5T5J6 900 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 SPATA4Q8NEY3 305 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 RAD54LQ92698 747 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 CEP72Q9P209 647 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 TSC22D4Q9Y3Q8 395 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 QSER1Q2KHR3 1735 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 LRP5O75197 1615 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 ZBTB5O15062 677 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 ZNF185O15231 689 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 GAP43P17677 238 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 RCN2Q14257 317 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
TSPAN9-201ENST00000011898 TNRC6CQ9HCJ0 1690 aaKnown RBP13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 TTC36A6NLP5 189 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 POTECB2RU33 542 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 HOXA7P31268 230 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 MYL7Q01449 175 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 COASYQ13057 564 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 C10orf76Q5T2E6 689 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 IFNB1P01574 187 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 CACNB3P54284 484 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 SNAP25P60880 206 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 HDLBPQ00341 1268 aaKnown RBP13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 NME8Q8N427 588 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 GDAP1Q8TB36 358 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 P3H4Q92791 437 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 FERMT1Q9BQL6 677 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 POLLQ9UGP5 575 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 SPEF2Q9C093 1822 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 SASH3O75995 380 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 ANP32DO95626 131 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 SBK1Q52WX2 424 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 PODNQ7Z5L7 613 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
TSPAN9-201ENST00000011898 USP17L10C9JJH3 530 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 ADCY8P40145 1251 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 PDE6CP51160 858 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 GLE1Q53GS7 698 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 MSANTD4Q8NCY6 345 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 PIGOQ8TEQ8 1089 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 NACC1Q96RE7 527 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 DHX36Q9H2U1 1008 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 VIPAS39Q9H9C1 493 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 KLRK1P26718 216 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 TRPC3Q13507 836 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 ARHGAP18Q8N392 663 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 GIMAP8Q8ND71 665 aaPredicted RBP13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 MAIP1Q8WWC4 291 aa13.02□□□□□ -0.32
TSPAN9-201ENST00000011898 ZBED4O75132 1171 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 KRT14P02533 472 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 CD19P15391 556 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 ATICP31939 592 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 MDH1P40925 334 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 HPCAL4Q9UM19 191 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 SNX12Q9UMY4 172 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 TFR2Q9UP52 801 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 CAPN12Q6ZSI9 719 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 ECT2Q9H8V3 914 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 TMEM165Q9HC07 324 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 PACSIN2Q9UNF0 486 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-201ENST00000011898 MRPS35P82673 323 aaKnown RBP13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 CTTNQ14247 550 aaKnown RBP13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 GRAMD1BQ3KR37 738 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 OTUD6AQ7L8S5 288 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 ARHGAP22Q7Z5H3 698 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 SFR1Q86XK3 245 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms