RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 NkapQ9D0F4 415 aaKnown RBP11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Riok3Q9DBU3 519 aaKnown RBP11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cpb1B2RS76 415 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm17615E9Q9P2 165 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ccdc84Q4VA36 332 aaKnown RBP11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ddx3xQ62167 662 aaKnown RBP11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ccpg1Q640L3 753 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Krit1Q6S5J6 736 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cyp26b1Q811W2 512 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Dnajc17Q91WT4 303 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Creb3l3Q91XE9 479 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Med24Q99K74 987 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 ThegQ9JMB1 375 aa11.38□□□□□ -0.59
Ptpre-208ENSMUST00000211788 A0A286YCQ6 122 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Nova2D3YVV7 556 aaKnown RBP11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Nr1i3O35627 358 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Dab2P98078 766 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 MaeaQ4VC33 396 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ccdc157Q5SPX1 718 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Klra7Q60654 280 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Sh3gl1Q62419 368 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Hdac10Q6P3E7 666 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Als2cr12Q8BVM7 383 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Zc3h6Q8BYK8 1177 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Trappc12Q8K2L8 797 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Vps37cQ8R105 352 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 CbsQ91WT9 561 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Atp6v0a4Q920R6 833 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 4931423N10RikQ9D4J9 382 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rab27aQ9ERI2 221 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Zfp213E9QAW0 468 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 P4hbP09103 509 aaKnown RBP11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 VimP20152 466 aaKnown RBP11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gad1P48318 593 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gas8Q60779 478 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 IgflQ6B9Z0 140 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Aldh5a1Q8BWF0 523 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Scyl2Q8CFE4 930 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Tmem221Q8K071 230 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ablim1Q8K4G5 861 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ndfip2Q91ZP6 311 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Tdrd1Q99MV1 1172 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Trim10Q9WUH5 489 aa11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Smchd1Q6P5D8 2007 aaKnown RBP11.37□□□□□ -0.59
Ptpre-208ENSMUST00000211788 1700016G14RikA0A286YCZ6 238 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Klhdc7aA2APT9 773 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Lrrc38A2VDH3 298 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Proca1B0QZF7 307 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ace3D0G895 737 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gm3415J3QMS8 315 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Barx2O08686 283 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Flot1O08917 428 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cd68P31996 326 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Stat4P42228 749 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Pla2g4aP47713 748 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rpl13P47963 211 aaKnown RBP11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rnf216P58283 853 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 GabpaQ00422 454 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Dpcr1Q3TNW5 500 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Mphosph8Q3TYA6 858 aaKnown RBP11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Agxt2Q3UEG6 513 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Mier3Q3UHF3 551 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Rnf207Q3V3A7 635 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Mapk6Q61532 720 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Tfe3Q64092 572 aaKnown RBP11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Gpr180Q8BPS4 441 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 LzicQ8K3C3 190 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 AslQ91YI0 464 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Polr3cQ9D483 533 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Akr1e2Q9DCT1 301 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Kcnh7Q9ER47 1195 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Cul3Q9JLV5 768 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Trpc5Q9QX29 975 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 JcadQ5DTX6 1320 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ccdc170D3YXL0 722 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Zfp408H7BX78 710 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Fgfr2P21803 821 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Kif5cP28738 956 aaKnown RBP11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 ClgnP52194 611 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Shox2P70390 331 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Etv6P97360 485 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Fgfr4Q03142 799 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Krt31Q61765 416 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Epha7Q61772 998 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ccdc181Q80ZU5 509 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Camkk2Q8C078 588 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Mmgt1Q8K273 131 aaKnown RBP11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Asic2Q925H0 512 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 PdhbQ9D051 359 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Sapcd2Q9D818 391 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Mzb1Q9D8I1 188 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 PapolbQ9WVP6 641 aa11.36□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Oip5A2AQ14 241 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Tnfrsf11aO35305 625 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Got1P05201 413 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Xrcc6P23475 608 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Serpinc1P32261 465 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Senp1P59110 640 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Ccdc148Q6P5U8 527 aa11.35□□□□□ -0.59
Ptpre-208ENSMUST00000211788 Krt9Q6RHW0 743 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms