RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Stk4Q9JI11 487 aa12.36□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rfwd2Q9R1A8 733 aaKnown RBP12.36□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Zfp984A2A7A2 547 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 AurkbO70126 345 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 CatspereP0DP43 985 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 FechP22315 420 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Fdx1P46656 188 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Nat3P50296 290 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Pon1P52430 355 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 NfixP70257 488 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rgs9bpQ148R9 237 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Vps41Q5KU39 853 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Cpa1Q7TPZ8 419 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ccdc28aQ8CEI3 192 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Klc3Q91W40 508 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Lrrc34Q9DAM1 415 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rnf4Q9QZS2 194 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Nup98Q6PFD9 1816 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Usp31E9Q6Y8 1344 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 DnttP09838 530 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Oprl1P35377 367 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Shox2P70390 331 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Acot6Q32Q92 419 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Pnma5Q5DTT8 618 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 CcnjlQ5SRT8 387 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Krt31Q61765 416 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Sin3bQ62141 1098 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Cdan1Q8CC12 1239 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Tdrd7Q8K1H1 1086 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Dtnbp1Q91WZ8 352 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ccdc88cQ6VGS5 2009 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 SrcapA0A087WQ44 3271 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Serpinb6eI7HJI3 429 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Art2bO35975 289 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ephb2P54763 986 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ptprn2P80560 1001 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 GmncQ3URY2 333 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Orc2Q60862 576 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Mcf2lQ64096 1149 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Pank4Q80YV4 820 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Gm5622Q810Q0 167 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Snip1Q8BIZ6 383 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rccd1Q8BTU7 377 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 PygbQ8CI94 843 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Kiaa1024Q8K3V7 917 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ccdc92Q8VDN4 314 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 CalcbQ99MP3 130 aa12.35□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Atp1b3P97370 278 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Phc1Q64028 1012 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Pja2Q80U04 707 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Tmem120aQ8C1E7 343 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 IscuQ9D7P6 168 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Adarb2Q9JI20 745 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Slc12a4Q9JIS8 1085 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Myl7Q9QVP4 175 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 BcamQ9R069 622 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Slc35g2D3YVE8 412 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Nr1i3O35627 358 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Eno1P17182 434 aaKnown RBP12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Uhmk1P97343 419 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rasip1Q3U0S6 961 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ccdc51Q3URS9 406 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Klra7Q60654 280 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 FdxrQ61578 494 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Acbd3Q8BMP6 525 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 SowahdQ8BY98 327 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Yars2Q8BYL4 472 aaKnown RBP12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Nup58Q8R332 587 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rnf138rt1Q9D9M9 248 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Nacc2Q9DCM7 586 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Tmem191cQ9JJB1 302 aa12.34□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Map3k15A2AQW0 1331 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Pitpnm2Q6ZPQ6 1335 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Skor2A7M7C7 1008 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Ebf2O08792 575 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Clk1P22518 483 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Psmc2P46471 433 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Abi2P62484 446 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Dab2ipQ3UHC7 1189 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Six2Q62232 296 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Ugt1a9Q62452 528 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Gpr180Q8BPS4 441 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 HibchQ8QZS1 385 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Cplx3Q8R1B5 158 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Sf3b3Q921M3 1217 aaKnown RBP12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Igf2bp3Q9CPN8 579 aaKnown RBP12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Ccdc124Q9D8X2 217 aaKnown RBP12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Scn11aQ9R053 1765 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Duox1A2AQ92 1551 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Tbc1d16A2ABG4 766 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 1700003F12RikA2AKE5 210 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Mmrn1B2RPV6 1210 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Agxt2Q3UEG6 513 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Krt15Q61414 452 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Glra4Q61603 456 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Nlrp14Q6B966 993 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Ano5Q75UR0 904 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Dpp8Q80YA7 892 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Bicd1Q8BR07 835 aa12.33□□□□□ -0.44
Prpf40b-208ENSMUST00000136980 Srfbp1Q9CZ91 441 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms