RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Scgb2b20Q9JI02 112 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Col5a2Q3U962 1497 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 GabreA2AMW3 916 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Myo6Q64331 1265 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Nop53Q8BK35 484 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 AsphQ8BSY0 741 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 PhykplQ8R1K4 467 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gpsm2Q8VDU0 679 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Klf15Q9EPW2 415 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Slc5a4aQ9ET37 656 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Got1P05201 413 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ogfod1Q3U0K8 545 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rrp36Q3UFY0 244 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Brd2Q7JJ13 798 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cep104Q80V31 926 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ythdf3Q8BYK6 585 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ccdc15Q8C9M2 810 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 PpatQ8CIH9 517 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pabpc6Q9D4E6 643 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rtn3Q9ES97 964 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Stk11Q9WTK7 436 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Hsf3D0VYS2 492 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Exoc4O35382 975 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 IvlP48997 467 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Fgfr4Q03142 799 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Siah1bQ06985 282 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Abl2Q4JIM5 1182 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Phactr4Q501J7 694 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Best3Q6H1V1 669 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Bicd1Q8BR07 835 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 SncbQ91ZZ3 133 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Xpo6Q924Z6 1125 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cep19Q9CQA8 163 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Zcrb1Q9CZ96 217 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Atp6v1e2Q9D593 226 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 4921524L21RikQ9D5T2 438 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Znf654Q9DAU9 571 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ace3D0G895 737 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 AfpP02772 605 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Kif5cP28738 956 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cd68P31996 326 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pon1P52430 355 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Vps41Q5KU39 853 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gas7Q60780 421 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pick1Q62083 416 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Krt12Q64291 487 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Smchd1Q6P5D8 2007 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Scfd1Q8BRF7 639 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Appl2Q8K3G9 662 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Nmrk1Q91W63 195 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Slc25a38Q91XD8 326 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 1700109H08RikQ9D9C0 210 aa10.58□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lrrc38A2VDH3 298 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Atp2c2A7L9Z8 944 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cfap70D3YVL2 1141 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ppp1r9aH3BJD6 1292 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pik3caP42337 1068 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Znf583Q3V080 568 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pcsk7Q61139 770 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Kif5bQ61768 963 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Oca2Q62052 833 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lrig3Q6P1C6 1117 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ttyh3Q6P5F7 524 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Kcnt1Q6ZPR4 1224 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 NrcamQ810U4 1256 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Elmo3Q8BYZ7 720 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tbc1d10cQ8C9V1 444 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Commd10Q8JZY2 202 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lrrc14Q8VC16 493 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mcur1Q9CXD6 340 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mis12Q9CY25 206 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 IscuQ9D7P6 168 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mmrn1B2RPV6 1210 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cpb1B2RS76 415 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 March10E9PX79 788 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Vmn2r77L7N2B7 854 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Agbl1Q09M05 972 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Spata18Q0P557 537 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mier3Q3UHF3 551 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 HnrnpdQ60668 355 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Grtp1Q9D3N8 359 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cmtm5Q9D6G9 156 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Styxl1Q9DAR2 321 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Hebp1Q9R257 190 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Col1a1P11087 1453 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gm45194A0A140LJG2 572 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Heatr4E9Q357 955 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 4930544D05RikJ3QK56 214 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gm5814J3QP80 125 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 FosP01101 380 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Dab2ipQ3UHC7 1189 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cracr2aQ3UP38 310 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ccdc50Q810U5 305 aaKnown RBP10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Trim65Q8BFW4 522 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cyp2d26Q8CIM7 500 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Reep2Q8VCD6 254 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mrfap1Q9CQL7 125 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Llcfc1Q9D9P8 108 aa10.57□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Myh14Q6URW6 2000 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Apba1B2RUJ5 842 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms