RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Cog5Q8C0L8 829 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Rbm19Q8R3C6 952 aaKnown RBP9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 SmtnQ921U8 923 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Fgfr1op2Q9CRA9 253 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 AacsQ9D2R0 672 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Jag1Q9QXX0 1218 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Fxr2Q9WVR4 673 aaKnown RBP9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Usp31E9Q6Y8 1344 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Nup62clA2AG10 272 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Map7d1A2AJI0 846 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Bpifb4A2BGH0 617 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Speer4dL7N216 212 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Ca8P28651 291 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Pde1bQ01065 535 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Tex35Q14BK3 207 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Yipf3Q3UDR8 347 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Dbndd1Q9CZ00 160 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Rnf225Q9D7D1 332 aa9.91□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Nme9A0A1L1SUL6 329 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Tnnc1P19123 161 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Gnat1P20612 350 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Akr1b7P21300 316 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Mnat1P51949 309 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 St3gal1P54751 337 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Sap30bpQ02614 308 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Agbl1Q09M05 972 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Ubxn2bQ0KL01 331 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 SfswapQ3USH5 945 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Smndc1Q8BGT7 238 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Tmem120aQ8C1E7 343 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 N4bp3Q8C7U1 537 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Sec63Q8VHE0 760 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Pcdhga10Q91XY9 930 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Ubxn2aQ99KJ0 258 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Pde6bP23440 856 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Lrch1P62046 709 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Ppp1r21Q3TDD9 780 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Cnot7Q60809 285 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Lmo3Q8BZL8 145 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Rbm28Q8CGC6 750 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Coq6Q8R1S0 476 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 RnmtQ9D0L8 465 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Dynll2Q9D0M5 89 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Klrc2Q9WTJ9 238 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Pdcd7Q9WTY1 482 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Noc2lQ9WV70 747 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Atp6v1c1Q9Z1G3 382 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Gm5737A0A140LI11 423 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Capn6O35646 641 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 StrnO55106 780 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Parp2O88554 559 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Atp1b3P97370 278 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Ssrp1Q08943 708 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Esyt2Q3TZZ7 845 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Mdh1bQ5F204 500 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 OgdhQ60597 1023 aaKnown RBP9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 SrlQ7TQ48 910 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Ttll4Q80UG8 1193 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 Tmem81Q9D5K1 259 aa9.9□□□□□ -0.82
Ccdc171-201ENSMUST00000053414 AdkP55264 361 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Znf354cQ571J5 560 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 LrmpQ60664 539 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Bank1Q80VH0 783 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Rhbdf2Q80WQ6 827 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Llgl1Q80Y17 1036 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Spire2Q8K1S6 718 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Plcb4Q91UZ1 1175 aa9.9□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Lrriq4A6H6A4 596 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Stox1B2RQL2 990 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Gm8298J3QPI0 401 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Rfpl4bJ3QPR6 266 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Rps6ka1P18653 724 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Xrcc6P23475 608 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Mcl1P97287 331 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 KizQ3UXL4 695 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 PapolaQ61183 739 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Capn3Q64691 821 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Enoph1Q8BGB7 257 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 BoraQ8BS90 525 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Fbxl5Q8C2S5 690 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Unc5bQ8K1S3 945 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Lars2Q8VDC0 902 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Rsrc1Q9DBU6 334 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Cyp39a1Q9JKJ9 470 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Megf6Q80V70 1572 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Col4a5Q63ZW6 1691 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Frmpd3A0A140LIW3 1774 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Zgrf1Q0VGT4 1863 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Gm9774A0A0A6YVU8 407 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Kcnh2O35219 1162 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Mllt10O54826 1068 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Dpcr1Q3TNW5 500 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Gm4981Q3ULJ8 291 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Ncapg2Q6DFV1 1138 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Rnf41Q8BH75 317 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Armcx3Q8BHS6 379 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Kiaa0319lQ8K135 1048 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Rfc4Q99J62 364 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 Sertad1Q9JL10 236 aa9.89□□□□□ -0.83
Ccdc171-201ENSMUST00000053414 PnkpQ9JLV6 522 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms