RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ttc22Q8C159 568 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ccdc159Q8C963 411 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ppil4Q9CXG3 492 aaKnown RBP11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nudt12Q9DCN1 462 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ddx24Q9ESV0 857 aaKnown RBP11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tulp1Q9Z273 543 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nav1Q8CH77 1875 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 FscbA1EGX6 1074 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Zfp839E9PUU5 921 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nrg3O35181 713 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Cyp19a1P28649 503 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Senp1P59110 640 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 GclcP97494 637 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 RelaQ04207 549 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rgl1Q60695 768 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ddx42Q810A7 929 aaKnown RBP11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tgif2lx2Q8K5B9 231 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Iqsec1Q8R0S2 961 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Dtnbp1Q91WZ8 352 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pcdhb5Q91XZ5 792 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Msantd4Q91YU3 345 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Taf11Q99JX1 211 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 MymkQ9D1N4 221 aa11.44□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nmt1O70310 496 aaKnown RBP11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 D1Pas1P16381 660 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ccng1P51945 294 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Caprin2Q05A80 1031 aaKnown RBP11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Adad1Q5SUE7 619 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rccd1Q8BTU7 377 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 AbraQ8BUZ1 375 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Wdr60Q8C761 999 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Plagl2Q925T4 496 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Josd2Q9CR30 188 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tlr9Q9EQU3 1032 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tmem47Q9JJG6 181 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pdzd4Q9QY39 772 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Klra10Q9R1G6 266 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Fer1l6E0CZ42 1862 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Lbhd1A0A087WPA0 259 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Scgb2b11A0A087WR49 112 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Itpripl1A2ASA8 547 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pfkfb3A7UAK5 555 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rps8P62242 208 aaKnown RBP11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 SlmapQ3URD3 845 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nwd2Q6P5U7 1742 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ppp2r5aQ6PD03 486 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Supt20hQ7TT00 530 aaKnown RBP11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ttc7aQ8BGB2 858 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ccser1Q8C0C4 895 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nmd3Q99L48 503 aaKnown RBP11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ttc5Q99LG4 440 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tpd52l2Q9CYZ2 220 aaKnown RBP11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Trim42Q9D2H5 723 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rabgap1lA6H6A9 815 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 DtnbO70585 659 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Syt2P46097 422 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Col6a1Q04857 1025 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ceacam5Q3UKK2 947 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Mpp4Q6P7F1 635 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Msl1Q6PDM1 616 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Tas2r109Q7M707 316 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Krt34Q9D646 392 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 MrrfQ9D6S7 262 aaKnown RBP11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rnf4Q9QZS2 194 aa11.43□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Apol7bB1AQP7 369 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gm3415J3QMS8 315 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Sesn2P58043 480 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Setd4P58467 439 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 PtgdrP70263 357 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ttbk2Q3UVR3 1243 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Apol7eQ3UZ24 369 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Rhox12Q4TU81 186 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Znf496Q5SXI5 585 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Znf280dQ68FE8 974 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Klhl14Q69ZK5 630 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Trim65Q8BFW4 522 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 VmacQ8BP01 174 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Nkiras1Q8CEC5 192 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Fsip1Q9D3V5 435 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gm3404Q9D506 307 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pard6bQ9JK83 371 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gm11983V9GXS8 105 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Naaladl2A0A0N4SUJ3 795 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 AK157302I3ITR1 129 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Pkn1P70268 946 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Klra4Q60651 263 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 OcrlQ6NVF0 900 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ccdc189Q6NZQ0 333 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Chn2Q80XD1 332 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Mageb18Q8BQR7 327 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Slc4a7Q8BTY2 1034 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Bbs7Q8K2G4 715 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ndufv1Q91YT0 464 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Lpgat1Q91YX5 370 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Ciao1Q99KN2 339 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gps1Q99LD4 471 aaKnown RBP11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Isca1Q9D924 129 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Shank3Q4ACU6 1730 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gm45194A0A140LJG2 572 aa11.42□□□□□ -0.58
Rnf40-201ENSMUST00000033088 Gm11549A0A286YD83 63 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms