RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Zbtb7bQ64321 544 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Wdr44Q6NVE8 915 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ssxb10Q6XAR7 170 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 HhatQ8BMT9 499 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Cyp2d26Q8CIM7 500 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Unc5bQ8K1S3 945 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Pcdhgb4Q91XX6 912 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Q922C1 641 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 MlxiplQ99MZ3 864 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 MagohbQ9CQL1 146 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ctnnbl1Q9CWL8 563 aaKnown RBP19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Extl2Q9ES89 330 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Adamtsl1Q8BLI0 1745 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Rnaseh1O70338 285 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Atp6v0a4Q920R6 833 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Snx24Q9CRB0 169 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gkap1Q9JMB0 366 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Astn1Q61137 1302 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 1700018F24RikB2RW27 314 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 MyocO70624 490 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Znf583Q3V080 568 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Pick1Q62083 416 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Elmo3Q8BYZ7 720 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 BbxQ8VBW5 907 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Klc4Q9DBS5 619 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Capn12Q9ER56 720 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Stat2Q9WVL2 923 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Kmt2eQ3UG20 1868 aa19.9■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Osbpl7A2A716 963 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gm14525B1AZA0 212 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gm2012B1B0R1 212 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gm3127E9Q9P5 263 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gm3453K7N724 263 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Prl6a1O35257 230 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Mier3Q3UHF3 551 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Erich4Q3UNU4 136 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gm14819Q62478 212 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Kcnt1Q6ZPR4 1224 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Slc35f6Q8VE96 372 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Scgb2b20Q9JI02 112 aa19.89■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gm45194A0A140LJG2 572 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Cpb1B2RS76 415 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Clrn2B2RVW2 232 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Gm10110D3Z5M2 615 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Gm6121L7MUF1 212 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 PtenO08586 403 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Q3TTJ4 293 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Cyfip2Q5SQX6 1253 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 E330017A01RikQ8BU47 192 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Nmrk1Q91W63 195 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Myh11O08638 1972 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 StrcQ8VIM6 1809 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Scn3aA2ASI5 1947 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 SrcapA0A087WQ44 3271 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Fbf1A2A870 1173 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Gm2030D3Z7C4 212 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Gm8994E9PV04 411 aaKnown RBP19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Vmn2r77L7N2B7 854 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Serpina1bP22599 413 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Hnrnph2P70333 449 aaKnown RBP19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Pbxip1Q3TVI8 727 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 R3hdm4Q4VBF2 262 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 OgdhQ60597 1023 aaKnown RBP19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Sun2Q8BJS4 731 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Pop1Q8K205 1045 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Grtp1Q9D3N8 359 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Capn15Q9JLG8 1095 aa19.89■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Ambra1A2AH22 1300 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 SynrgQ5SV85 1306 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Fyb2A2A995 729 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Cdk14O35495 469 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Slc27a3O88561 667 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Jdp2P97875 163 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Col9a2Q07643 688 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Zfp957Q3UT76 567 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Ndufaf2Q59J78 168 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Erlin2Q8BFZ9 340 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Rusc1Q8BG26 893 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Plcg2Q8CIH5 1265 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Bst2Q8R2Q8 172 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Ebag9Q9D0V7 213 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Mia3Q8BI84 1930 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Hnrnph1O35737 449 aaKnown RBP19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Cep126Q0VBV7 1103 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 D630036H23RikQ3UQD6 204 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Sfi1Q3UZY0 1216 aaKnown RBP19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Adad1Q5SUE7 619 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Klra6Q60653 266 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Tmem132dQ76HP3 1097 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Pdxdc1Q99K01 787 aaKnown RBP19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Psma8Q9CWH6 250 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Ssr1Q9CY50 286 aaKnown RBP19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Col2a1P28481 1487 aa19.88■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Trim55G3X8Y1 545 aa19.87■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Jade3Q6IE82 823 aa19.87■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Stk10O55098 966 aa19.87■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Rhox12Q4TU81 186 aa19.87■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Kif5bQ61768 963 aa19.87■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Btnl9Q8BJE2 536 aa19.87■□□□□ 0.77
Ccdc3-201ENSMUST00000027988 Pkn2Q8BWW9 983 aa19.87■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms