RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	DLD1	P32891	587 aa		5.11	□□□□□ -1.59
APQ12	YIL040W	DIT2	P21595	489 aa		5.09	□□□□□ -1.59
APQ12	YIL040W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
APQ12	YIL040W	ROG3	P43602	733 aa		5.09	□□□□□ -1.59
APQ12	YIL040W	LSB3	P43603	459 aa	Known RBP	5.09	□□□□□ -1.59
APQ12	YIL040W	TCB1	Q12466	1186 aa		5.09	□□□□□ -1.59
APQ12	YIL040W	SPB4	P25808	606 aa	Predicted RBP	5.08	□□□□□ -1.6
APQ12	YIL040W	YJR098C	P47139	656 aa		5.08	□□□□□ -1.6
APQ12	YIL040W	MMP1	Q12372	583 aa		5.08	□□□□□ -1.6
APQ12	YIL040W	DPH6	Q12429	685 aa		5.08	□□□□□ -1.6
APQ12	YIL040W	YBL086C	P38177	466 aa		5.07	□□□□□ -1.6
APQ12	YIL040W	APP1	P53933	587 aa		5.07	□□□□□ -1.6
APQ12	YIL040W	VAC17	P25591	423 aa		5.06	□□□□□ -1.6
APQ12	YIL040W	OSH7	P38755	437 aa		5.06	□□□□□ -1.6
APQ12	YIL040W	HST2	P53686	357 aa		5.06	□□□□□ -1.6
APQ12	YIL040W	TY1A-MR1	Q04215	440 aa		5.06	□□□□□ -1.6
APQ12	YIL040W	PHM7	Q12252	991 aa		5.05	□□□□□ -1.6
APQ12	YIL040W	GLN1	P32288	370 aa	Known RBP	5.04	□□□□□ -1.6
APQ12	YIL040W	ITT1	Q04638	464 aa		5.04	□□□□□ -1.6
APQ12	YIL040W	ESS1	P22696	170 aa		5.03	□□□□□ -1.6
APQ12	YIL040W	LYS5	P50113	272 aa		5.03	□□□□□ -1.6
APQ12	YIL040W	MDJ1	P35191	511 aa		5.02	□□□□□ -1.61
APQ12	YIL040W	NSG2	P53898	299 aa		5.01	□□□□□ -1.61
APQ12	YIL040W	ATF2	P53296	535 aa		5	□□□□□ -1.61
APQ12	YIL040W	CCP1	P00431	361 aa		4.99	□□□□□ -1.61
APQ12	YIL040W	EMW1	P42842	904 aa	Known RBP	4.99	□□□□□ -1.61
APQ12	YIL040W	YJU3	P28321	313 aa		4.98	□□□□□ -1.61
APQ12	YIL040W	MKS1	P34072	584 aa		4.98	□□□□□ -1.61
APQ12	YIL040W	JJJ3	P47138	172 aa		4.98	□□□□□ -1.61
APQ12	YIL040W	DFG5	Q05031	458 aa		4.98	□□□□□ -1.61
APQ12	YIL040W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	RIP-Chip
APQ12	YIL040W	THI72	Q08579	599 aa		4.97	□□□□□ -1.61
APQ12	YIL040W	BDS1	Q08347	646 aa		4.96	□□□□□ -1.62
APQ12	YIL040W	SAS10	Q12136	610 aa	Predicted RBP	4.95	□□□□□ -1.62
APQ12	YIL040W	AI1	P03875	834 aa		4.94	□□□□□ -1.62
APQ12	YIL040W	ARG8	P18544	423 aa		4.93	□□□□□ -1.62
APQ12	YIL040W	NAM8	Q00539	523 aa	Known RBP	4.93	□□□□□ -1.62
APQ12	YIL040W	PKH3	Q03306	898 aa	Predicted RBP	4.93	□□□□□ -1.62
APQ12	YIL040W	CDC19	P00549	500 aa	Known RBP	4.92	□□□□□ -1.62
APQ12	YIL040W	SBP1	P10080	294 aa	Known RBP	4.91	□□□□□ -1.62
APQ12	YIL040W	RSC30	P38781	883 aa		4.91	□□□□□ -1.62
APQ12	YIL040W	CEM1	P39525	442 aa		4.9	□□□□□ -1.63
APQ12	YIL040W	FIG4	P42837	879 aa		4.9	□□□□□ -1.63
APQ12	YIL040W	FBP26	P32604	452 aa		4.89	□□□□□ -1.63
APQ12	YIL040W	CCT8	P47079	568 aa	Known RBP	4.89	□□□□□ -1.63
APQ12	YIL040W	CUZ1	P53899	274 aa		4.89	□□□□□ -1.63
APQ12	YIL040W	YPR053C	Q6Q5F3	151 aa		4.88	□□□□□ -1.63
APQ12	YIL040W	TEC1	P18412	486 aa		4.87	□□□□□ -1.63
APQ12	YIL040W	YFL066C	P43538	392 aa		4.87	□□□□□ -1.63
APQ12	YIL040W	GLC3	P32775	704 aa		4.86	□□□□□ -1.63
APQ12	YIL040W	VTC4	P47075	721 aa		4.86	□□□□□ -1.63
APQ12	YIL040W	STE6	P12866	1290 aa		4.85	□□□□□ -1.63
APQ12	YIL040W	DLD3	P39976	496 aa	Known RBP	4.85	□□□□□ -1.63
APQ12	YIL040W	ADE12	P80210	433 aa	Known RBP	4.84	□□□□□ -1.63
APQ12	YIL040W	YMR265C	Q03508	461 aa	Known RBP	4.84	□□□□□ -1.63
APQ12	YIL040W	KTR1	P27810	393 aa	Known RBP	4.83	□□□□□ -1.64
APQ12	YIL040W	RPP2B	P02400	110 aa	Known RBP	4.82	□□□□□ -1.64
APQ12	YIL040W	DAL1	P32375	460 aa		4.82	□□□□□ -1.64
APQ12	YIL040W	DMA1	P38823	416 aa		4.82	□□□□□ -1.64
APQ12	YIL040W	YMR187C	Q03236	431 aa		4.82	□□□□□ -1.64
APQ12	YIL040W	GLT1	Q12680	2145 aa	Known RBP	4.82	□□□□□ -1.64
APQ12	YIL040W	SBE2	P42223	864 aa	Known RBP	4.81	□□□□□ -1.64
APQ12	YIL040W	YNR021W	P53723	404 aa	Known RBP	4.81	□□□□□ -1.64
APQ12	YIL040W	ISU1	Q03020	165 aa		4.81	□□□□□ -1.64
APQ12	YIL040W	TDA6	Q06466	467 aa		4.81	□□□□□ -1.64
APQ12	YIL040W	ATG20	Q07528	640 aa		4.81	□□□□□ -1.64
APQ12	YIL040W	DIT1	P21623	536 aa		4.8	□□□□□ -1.64
APQ12	YIL040W	CSN12	P47130	423 aa		4.8	□□□□□ -1.64
APQ12	YIL040W	SYT1	Q06836	1226 aa		4.8	□□□□□ -1.64
APQ12	YIL040W	RAD59	Q12223	238 aa		4.8	□□□□□ -1.64
APQ12	YIL040W	GUT2	P32191	649 aa		4.79	□□□□□ -1.64
APQ12	YIL040W	UBP15	P50101	1230 aa		4.79	□□□□□ -1.64
APQ12	YIL040W	YNR014W	P53719	212 aa		4.79	□□□□□ -1.64
APQ12	YIL040W	KRE33	P53914	1056 aa	Known RBP	4.79	□□□□□ -1.64
APQ12	YIL040W	SKN7	P38889	622 aa		4.78	□□□□□ -1.64
APQ12	YIL040W	YPR084W	Q06821	456 aa		4.78	□□□□□ -1.64
APQ12	YIL040W	STE20	Q03497	939 aa	Known RBP	4.75	□□□□□ -1.65
APQ12	YIL040W	AHP1	P38013	176 aa	Known RBP	4.74	□□□□□ -1.65
APQ12	YIL040W	YDR461C-A	Q2V2P7	80 aa		4.74	□□□□□ -1.65
APQ12	YIL040W	DAT1	P13483	248 aa	Known RBP	4.73	□□□□□ -1.65
APQ12	YIL040W	MSN5	P52918	1224 aa		4.73	□□□□□ -1.65
APQ12	YIL040W	AIM7	Q12156	149 aa		4.72	□□□□□ -1.65
APQ12	YIL040W	WTM2	Q12206	467 aa		4.72	□□□□□ -1.65
APQ12	YIL040W	MAK16	P10962	306 aa	Predicted RBP	4.71	□□□□□ -1.66
APQ12	YIL040W	SSN3	P39073	555 aa		4.71	□□□□□ -1.66
APQ12	YIL040W	BOI2	P39969	1040 aa		4.71	□□□□□ -1.66
APQ12	YIL040W	SLA1	P32790	1244 aa		4.7	□□□□□ -1.66
APQ12	YIL040W	MCX1	P38323	520 aa	Predicted RBP	4.7	□□□□□ -1.66
APQ12	YIL040W	ALA1	P40825	983 aa	Known RBP	4.7	□□□□□ -1.66
APQ12	YIL040W	FPS1	P23900	669 aa		4.69	□□□□□ -1.66
APQ12	YIL040W	UTR2	P32623	467 aa		4.69	□□□□□ -1.66
APQ12	YIL040W	ISR1	Q06098	443 aa	Known RBP	4.69	□□□□□ -1.66
APQ12	YIL040W	FRA1	Q07825	749 aa		4.69	□□□□□ -1.66
APQ12	YIL040W	TY1A-DR3	Q12441	440 aa		4.69	□□□□□ -1.66
APQ12	YIL040W	TBS1	P38114	1094 aa		4.68	□□□□□ -1.66
APQ12	YIL040W	UTP7	P40055	554 aa	Known RBP	4.68	□□□□□ -1.66
APQ12	YIL040W	GPM1	P00950	247 aa	Known RBP	4.67	□□□□□ -1.66
APQ12	YIL040W	YCK2	P23292	546 aa	Known RBP	4.67	□□□□□ -1.66
APQ12	YIL040W	MAC1	P35192	417 aa		4.67	□□□□□ -1.66
APQ12	YIL040W	MET1	P36150	593 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms