RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PKD2Q13563 968 aa25.55■■□□□ 1.68
PHGDH-232ENST00000641947 MROH1Q8NDA8 1641 aa25.54■■□□□ 1.68
PHGDH-232ENST00000641947 TEX14Q8IWB6 1497 aa25.53■■□□□ 1.68
PHGDH-232ENST00000641947 DHX29Q7Z478 1369 aaKnown RBP25.52■■□□□ 1.68
PHGDH-232ENST00000641947 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
PHGDH-232ENST00000641947 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
PHGDH-232ENST00000641947 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.67
PHGDH-232ENST00000641947 TIMELESSQ9UNS1 1208 aa25.51■■□□□ 1.67
PHGDH-232ENST00000641947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.5■■□□□ 1.675e-16■■□□□ 13.6
PHGDH-232ENST00000641947 A2MP01023 1474 aa25.49■■□□□ 1.67
PHGDH-232ENST00000641947 TONSLQ96HA7 1378 aa25.49■■□□□ 1.67
PHGDH-232ENST00000641947 ZMYM4Q5VZL5 1548 aa25.48■■□□□ 1.67
PHGDH-232ENST00000641947 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
PHGDH-232ENST00000641947 PRDM15P57071 1507 aaPredicted RBP25.48■■□□□ 1.67
PHGDH-232ENST00000641947 RNF17Q9BXT8 1623 aaKnown RBP25.47■■□□□ 1.67
PHGDH-232ENST00000641947 BCORL1Q5H9F3 1711 aa25.47■■□□□ 1.67
PHGDH-232ENST00000641947 E9PCH4 1651 aa25.45■■□□□ 1.67
PHGDH-232ENST00000641947 YEATS2Q9ULM3 1422 aa25.44■■□□□ 1.66
PHGDH-232ENST00000641947 PPP1R15AO75807 674 aaPredicted RBP25.43■■□□□ 1.66
PHGDH-232ENST00000641947 TET3O43151 1660 aa25.42■■□□□ 1.66
PHGDH-232ENST00000641947 KIF3BO15066 747 aa25.41■■□□□ 1.66
PHGDH-232ENST00000641947 COL17A1Q9UMD9 1497 aaPredicted RBP25.41■■□□□ 1.66
PHGDH-232ENST00000641947 CEP152O94986 1710 aa25.4■■□□□ 1.66
PHGDH-232ENST00000641947 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
PHGDH-232ENST00000641947 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
PHGDH-232ENST00000641947 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
PHGDH-232ENST00000641947 L3MBTL2Q969R5 705 aa25.34■■□□□ 1.65
PHGDH-232ENST00000641947 SPHKAPQ2M3C7 1700 aa25.34■■□□□ 1.65
PHGDH-232ENST00000641947 SIGLEC1Q9BZZ2 1709 aa25.33■■□□□ 1.64
PHGDH-232ENST00000641947 ATP10AO60312 1499 aa25.31■■□□□ 1.64
PHGDH-232ENST00000641947 EFCAB6Q5THR3 1501 aa25.3■■□□□ 1.64
PHGDH-232ENST00000641947 LMTK2Q8IWU2 1503 aa25.3■■□□□ 1.64
PHGDH-232ENST00000641947 KANK1Q14678 1352 aa25.3■■□□□ 1.64
PHGDH-232ENST00000641947 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
PHGDH-232ENST00000641947 ARHGEF40Q8TER5 1519 aa25.27■■□□□ 1.64
PHGDH-232ENST00000641947 TRPM2O94759 1503 aa25.26■■□□□ 1.63
PHGDH-232ENST00000641947 CCDC144AA2RUR9 1427 aa25.25■■□□□ 1.63
PHGDH-232ENST00000641947 ABCC3O15438 1527 aa25.25■■□□□ 1.63
PHGDH-232ENST00000641947 PTPRTO14522 1441 aa25.23■■□□□ 1.63
PHGDH-232ENST00000641947 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
PHGDH-232ENST00000641947 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
PHGDH-232ENST00000641947 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
PHGDH-232ENST00000641947 GGT6Q6P531 493 aa25.22■■□□□ 1.63
PHGDH-232ENST00000641947 ZC3H13Q5T200 1668 aaKnown RBP25.2■■□□□ 1.62
PHGDH-232ENST00000641947 NBPF8Q3BBV2 869 aa25.19■■□□□ 1.62
PHGDH-232ENST00000641947 AGLP35573 1532 aa25.17■■□□□ 1.62
PHGDH-232ENST00000641947 UGGT1Q9NYU2 1555 aa25.16■■□□□ 1.62
PHGDH-232ENST00000641947 NPATQ14207 1427 aa25.15■■□□□ 1.62
PHGDH-232ENST00000641947 TRHP20396 242 aaPredicted RBP25.14■■□□□ 1.62
PHGDH-232ENST00000641947 SPATA31E1Q6ZUB1 1445 aa25.12■■□□□ 1.61
PHGDH-232ENST00000641947 UHRF1BP1Q6BDS2 1440 aa25.11■■□□□ 1.61
PHGDH-232ENST00000641947 WASHC2CQ9Y4E1 1318 aa25.1■■□□□ 1.61
PHGDH-232ENST00000641947 KIF1BO60333 1816 aa25.09■■□□□ 1.61
PHGDH-232ENST00000641947 MROH2AA6NES4 1674 aa25.09■■□□□ 1.61
PHGDH-232ENST00000641947 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.6
PHGDH-232ENST00000641947 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
PHGDH-232ENST00000641947 HIRIP3Q9BW71 556 aaPredicted RBP25.06■■□□□ 1.6
PHGDH-232ENST00000641947 RGL3Q3MIN7 710 aa25.05■■□□□ 1.6
PHGDH-232ENST00000641947 SYNMO15061 1565 aa25.05■■□□□ 1.6
PHGDH-232ENST00000641947 DCAF11Q8TEB1 546 aa25.05■■□□□ 1.6
PHGDH-232ENST00000641947 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
PHGDH-232ENST00000641947 TRPM1Q7Z4N2 1603 aa25.04■■□□□ 1.6
PHGDH-232ENST00000641947 ARHGAP31Q2M1Z3 1444 aa25.03■■□□□ 1.6
PHGDH-232ENST00000641947 NEURL4Q96JN8 1562 aa25.03■■□□□ 1.6
PHGDH-232ENST00000641947 RALGAPBQ86X10 1494 aa25.03■■□□□ 1.6
PHGDH-232ENST00000641947 ZNF326Q5BKZ1 582 aaKnown RBP25.03■■□□□ 1.6
PHGDH-232ENST00000641947 KDM2AQ9Y2K7 1162 aa25.03■■□□□ 1.6
PHGDH-232ENST00000641947 PIK3C2BO00750 1634 aa25.02■■□□□ 1.6
PHGDH-232ENST00000641947 NOS1P29475 1434 aa25.02■■□□□ 1.6
PHGDH-232ENST00000641947 IFT172Q9UG01 1749 aa25.02■■□□□ 1.6
PHGDH-232ENST00000641947 PRAG1Q86YV5 1406 aa25.01■■□□□ 1.59
PHGDH-232ENST00000641947 CNTLNQ9NXG0 1405 aa25.01■■□□□ 1.59
PHGDH-232ENST00000641947 ADGRB3O60242 1522 aa24.98■■□□□ 1.59
PHGDH-232ENST00000641947 MADDQ8WXG6 1647 aa24.98■■□□□ 1.59
PHGDH-232ENST00000641947 HSPA5P11021 654 aaKnown RBP24.96■■□□□ 1.59
PHGDH-232ENST00000641947 MLECQ14165 292 aa24.93■■□□□ 1.58
PHGDH-232ENST00000641947 MYO5BQ9ULV0 1848 aa24.93■■□□□ 1.58
PHGDH-232ENST00000641947 PPLO60437 1756 aa24.91■■□□□ 1.58
PHGDH-232ENST00000641947 EIF4G2P78344 907 aaKnown RBP eCLIP24.91■■□□□ 1.587e-14■■■■■ 63.8
PHGDH-232ENST00000641947 PPP6R1Q9UPN7 881 aa24.9■■□□□ 1.58
PHGDH-232ENST00000641947 ERVK-7P63135 1459 aa24.89■■□□□ 1.58
PHGDH-232ENST00000641947 POLR1AO95602 1720 aaPredicted RBP24.89■■□□□ 1.57
PHGDH-232ENST00000641947 LAMC1P11047 1609 aa24.88■■□□□ 1.57
PHGDH-232ENST00000641947 USP47Q96K76 1375 aa24.86■■□□□ 1.57
PHGDH-232ENST00000641947 FBXO31Q5XUX0 539 aaPredicted RBP24.85■■□□□ 1.57
PHGDH-232ENST00000641947 SPATA31D1Q6ZQQ2 1576 aa24.85■■□□□ 1.57
PHGDH-232ENST00000641947 MYOM2P54296 1465 aa24.85■■□□□ 1.57
PHGDH-232ENST00000641947 TMEM131LA2VDJ0 1609 aa24.83■■□□□ 1.57
PHGDH-232ENST00000641947 ROCK2O75116 1388 aaKnown RBP24.83■■□□□ 1.57
PHGDH-232ENST00000641947 GPRASP1Q5JY77 1395 aa24.83■■□□□ 1.57
PHGDH-232ENST00000641947 ARID4BQ4LE39 1312 aaPredicted RBP24.83■■□□□ 1.57
PHGDH-232ENST00000641947 NBPF1Q3BBV0 1214 aa24.82■■□□□ 1.56
PHGDH-232ENST00000641947 KIAA1210Q9ULL0 1709 aa24.82■■□□□ 1.56
PHGDH-232ENST00000641947 CARD11Q9BXL7 1154 aa24.81■■□□□ 1.56
PHGDH-232ENST00000641947 NRXN1Q9ULB1 1477 aa24.8■■□□□ 1.56
PHGDH-232ENST00000641947 CHGAP10645 457 aaKnown RBP24.8■■□□□ 1.56
PHGDH-232ENST00000641947 IDI1Q13907 227 aa24.8■■□□□ 1.56
PHGDH-232ENST00000641947 NEXMIFQ5QGS0 1516 aa24.79■■□□□ 1.56
PHGDH-232ENST00000641947 FER1L4A9Z1Z3 1794 aa24.79■■□□□ 1.56
PHGDH-232ENST00000641947 C11orf95C9JLR9 678 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms