RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 UBAP1LF5GYI3 381 aa19.38■□□□□ 0.69
PHGDH-221ENST00000641573 CROCC2H7BZ55 1655 aa19.38■□□□□ 0.69
PHGDH-221ENST00000641573 MBD5Q9P267 1494 aa19.38■□□□□ 0.69
PHGDH-221ENST00000641573 AGLP35573 1532 aa19.37■□□□□ 0.69
PHGDH-221ENST00000641573 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
PHGDH-221ENST00000641573 GCC2Q8IWJ2 1684 aa19.36■□□□□ 0.69
PHGDH-221ENST00000641573 ABCA6Q8N139 1617 aa19.36■□□□□ 0.69
PHGDH-221ENST00000641573 MLH3Q9UHC1 1453 aa19.36■□□□□ 0.69
PHGDH-221ENST00000641573 KIAA1107Q9UPP5 1409 aa19.36■□□□□ 0.69
PHGDH-221ENST00000641573 RSPH4AQ5TD94 716 aa19.36■□□□□ 0.69
PHGDH-221ENST00000641573 SHANK2Q9UPX8 1470 aa19.35■□□□□ 0.69
PHGDH-221ENST00000641573 CAMSAP1Q5T5Y3 1602 aa19.35■□□□□ 0.69
PHGDH-221ENST00000641573 SYCP2Q9BX26 1530 aa19.35■□□□□ 0.69
PHGDH-221ENST00000641573 ADGRL2O95490 1459 aa19.35■□□□□ 0.69
PHGDH-221ENST00000641573 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
PHGDH-221ENST00000641573 ADGBQ8N7X0 1667 aa19.34■□□□□ 0.69
PHGDH-221ENST00000641573 TSPY4P0CV99 314 aa19.33■□□□□ 0.68
PHGDH-221ENST00000641573 TSPY10P0CW01 314 aa19.33■□□□□ 0.68
PHGDH-221ENST00000641573 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
PHGDH-221ENST00000641573 ZNF335Q9H4Z2 1342 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-221ENST00000641573 NPATQ14207 1427 aa19.31■□□□□ 0.68
PHGDH-221ENST00000641573 CLSPNQ9HAW4 1339 aa19.29■□□□□ 0.68
PHGDH-221ENST00000641573 NCKAP5LQ9HCH0 1330 aa19.28■□□□□ 0.68
PHGDH-221ENST00000641573 KIDINS220Q9ULH0 1771 aa19.28■□□□□ 0.68
PHGDH-221ENST00000641573 MAST1Q9Y2H9 1570 aa19.27■□□□□ 0.67
PHGDH-221ENST00000641573 MROH2AA6NES4 1674 aa19.27■□□□□ 0.67
PHGDH-221ENST00000641573 PKD2Q13563 968 aa19.25■□□□□ 0.67
PHGDH-221ENST00000641573 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
PHGDH-221ENST00000641573 ACIN1Q9UKV3 1341 aaKnown RBP19.24■□□□□ 0.67
PHGDH-221ENST00000641573 ZMYM3Q14202 1370 aa19.23■□□□□ 0.67
PHGDH-221ENST00000641573 PLA2R1Q13018 1463 aa19.22■□□□□ 0.67
PHGDH-221ENST00000641573 INO80Q9ULG1 1556 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-221ENST00000641573 KIF15Q9NS87 1388 aa19.21■□□□□ 0.67
PHGDH-221ENST00000641573 MED1Q15648 1581 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-221ENST00000641573 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
PHGDH-221ENST00000641573 ANKRD50Q9ULJ7 1429 aa19.2■□□□□ 0.66
PHGDH-221ENST00000641573 PPP6R1Q9UPN7 881 aa19.2■□□□□ 0.66
PHGDH-221ENST00000641573 MYO3AQ8NEV4 1616 aa19.2■□□□□ 0.66
PHGDH-221ENST00000641573 ZNF142P52746 1687 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-221ENST00000641573 HSPA1LP34931 641 aa19.18■□□□□ 0.66
PHGDH-221ENST00000641573 PIP4K2BP78356 416 aa19.18■□□□□ 0.66
PHGDH-221ENST00000641573 CEP170BQ9Y4F5 1589 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-221ENST00000641573 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
PHGDH-221ENST00000641573 ATP7AQ04656 1500 aa19.17■□□□□ 0.66
PHGDH-221ENST00000641573 PLXNC1O60486 1568 aa19.17■□□□□ 0.66
PHGDH-221ENST00000641573 SPAG9O60271 1321 aaKnown RBP19.17■□□□□ 0.66
PHGDH-221ENST00000641573 TOM1O60784 492 aa19.16■□□□□ 0.66
PHGDH-221ENST00000641573 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-221ENST00000641573 CLTCQ00610 1675 aaKnown RBP19.15■□□□□ 0.66
PHGDH-221ENST00000641573 MPHOSPH9Q99550 1183 aa19.12■□□□□ 0.65
PHGDH-221ENST00000641573 DUOX2Q9NRD8 1548 aa19.11■□□□□ 0.65
PHGDH-221ENST00000641573 GGT6Q6P531 493 aa19.1■□□□□ 0.65
PHGDH-221ENST00000641573 CPS1P31327 1500 aa19.1■□□□□ 0.65
PHGDH-221ENST00000641573 A2MP01023 1474 aa19.08■□□□□ 0.64
PHGDH-221ENST00000641573 PZPP20742 1482 aa19.08■□□□□ 0.64
PHGDH-221ENST00000641573 SIN3AQ96ST3 1273 aa19.07■□□□□ 0.64
PHGDH-221ENST00000641573 A2ML1A8K2U0 1454 aa19.07■□□□□ 0.64
PHGDH-221ENST00000641573 ERBINQ96RT1 1412 aa19.07■□□□□ 0.64
PHGDH-221ENST00000641573 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
PHGDH-221ENST00000641573 NUP155O75694 1391 aa19.06■□□□□ 0.64
PHGDH-221ENST00000641573 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
PHGDH-221ENST00000641573 NEUROD1Q13562 356 aa19.04■□□□□ 0.64
PHGDH-221ENST00000641573 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
PHGDH-221ENST00000641573 DHX29Q7Z478 1369 aaKnown RBP19.03■□□□□ 0.64
PHGDH-221ENST00000641573 UNC13BO14795 1591 aa19.02■□□□□ 0.63
PHGDH-221ENST00000641573 FOXD1Q16676 465 aa19■□□□□ 0.63
PHGDH-221ENST00000641573 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
PHGDH-221ENST00000641573 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
PHGDH-221ENST00000641573 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
PHGDH-221ENST00000641573 TNRQ92752 1358 aa18.97■□□□□ 0.63
PHGDH-221ENST00000641573 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
PHGDH-221ENST00000641573 ANKLE2Q86XL3 938 aa18.97■□□□□ 0.63
PHGDH-221ENST00000641573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.635e-16■■□□□ 13.6
PHGDH-221ENST00000641573 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-221ENST00000641573 IQGAP3Q86VI3 1631 aa18.93■□□□□ 0.62
PHGDH-221ENST00000641573 EIF2AK4Q9P2K8 1649 aaKnown RBP18.93■□□□□ 0.62
PHGDH-221ENST00000641573 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
PHGDH-221ENST00000641573 THEMISQ8N1K5 641 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-221ENST00000641573 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
PHGDH-221ENST00000641573 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-221ENST00000641573 KIF3BO15066 747 aa18.91■□□□□ 0.62
PHGDH-221ENST00000641573 FBXO31Q5XUX0 539 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-221ENST00000641573 DEPDC5O75140 1603 aa18.9■□□□□ 0.62
PHGDH-221ENST00000641573 RNF17Q9BXT8 1623 aaKnown RBP18.9■□□□□ 0.62
PHGDH-221ENST00000641573 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.61
PHGDH-221ENST00000641573 ALKQ9UM73 1620 aa18.89■□□□□ 0.61
PHGDH-221ENST00000641573 UGGT1Q9NYU2 1555 aa18.88■□□□□ 0.61
PHGDH-221ENST00000641573 MED14O60244 1454 aa18.87■□□□□ 0.61
PHGDH-221ENST00000641573 KANK1Q14678 1352 aa18.87■□□□□ 0.61
PHGDH-221ENST00000641573 RPRD2Q5VT52 1461 aaKnown RBP18.87■□□□□ 0.61
PHGDH-221ENST00000641573 NLRP1Q9C000 1473 aa18.87■□□□□ 0.61
PHGDH-221ENST00000641573 WASHC2CQ9Y4E1 1318 aa18.86■□□□□ 0.61
PHGDH-221ENST00000641573 IQGAP1P46940 1657 aa18.85■□□□□ 0.61
PHGDH-221ENST00000641573 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-221ENST00000641573 SYNMO15061 1565 aa18.85■□□□□ 0.61
PHGDH-221ENST00000641573 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-221ENST00000641573 LRRC7Q96NW7 1537 aa18.83■□□□□ 0.6
PHGDH-221ENST00000641573 ZC3H13Q5T200 1668 aaKnown RBP18.82■□□□□ 0.6
PHGDH-221ENST00000641573 TET3O43151 1660 aa18.79■□□□□ 0.6
PHGDH-221ENST00000641573 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms