RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 FAM135AQ9P2D6 1515 aa26.49■■□□□ 1.83
PHGDH-213ENST00000641272 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
PHGDH-213ENST00000641272 TCOF1Q13428 1488 aaKnown RBP26.48■■□□□ 1.83
PHGDH-213ENST00000641272 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
PHGDH-213ENST00000641272 PPP6R1Q9UPN7 881 aa26.47■■□□□ 1.83
PHGDH-213ENST00000641272 PZPP20742 1482 aa26.47■■□□□ 1.83
PHGDH-213ENST00000641272 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
PHGDH-213ENST00000641272 POLR1AO95602 1720 aaPredicted RBP26.46■■□□□ 1.83
PHGDH-213ENST00000641272 TNRQ92752 1358 aa26.45■■□□□ 1.82
PHGDH-213ENST00000641272 RSPH4AQ5TD94 716 aa26.44■■□□□ 1.82
PHGDH-213ENST00000641272 TSPY4P0CV99 314 aa26.43■■□□□ 1.82
PHGDH-213ENST00000641272 TSPY10P0CW01 314 aa26.43■■□□□ 1.82
PHGDH-213ENST00000641272 FBXO31Q5XUX0 539 aaPredicted RBP26.43■■□□□ 1.82
PHGDH-213ENST00000641272 ZNF335Q9H4Z2 1342 aaPredicted RBP26.42■■□□□ 1.82
PHGDH-213ENST00000641272 CROCC2H7BZ55 1655 aa26.42■■□□□ 1.82
PHGDH-213ENST00000641272 EIF2AK4Q9P2K8 1649 aaKnown RBP26.42■■□□□ 1.82
PHGDH-213ENST00000641272 WASHC2CQ9Y4E1 1318 aa26.41■■□□□ 1.82
PHGDH-213ENST00000641272 ZC3H13Q5T200 1668 aaKnown RBP26.41■■□□□ 1.82
PHGDH-213ENST00000641272 CEP152O94986 1710 aa26.4■■□□□ 1.82
PHGDH-213ENST00000641272 MIA2Q96PC5 1412 aa26.39■■□□□ 1.82
PHGDH-213ENST00000641272 ABCC3O15438 1527 aa26.39■■□□□ 1.82
PHGDH-213ENST00000641272 MROH1Q8NDA8 1641 aa26.39■■□□□ 1.82
PHGDH-213ENST00000641272 NEURL4Q96JN8 1562 aa26.39■■□□□ 1.82
PHGDH-213ENST00000641272 IQSEC2Q5JU85 1478 aa26.38■■□□□ 1.81
PHGDH-213ENST00000641272 PTPN23Q9H3S7 1636 aa26.37■■□□□ 1.81
PHGDH-213ENST00000641272 PKD2Q13563 968 aa26.37■■□□□ 1.81
PHGDH-213ENST00000641272 DUOX2Q9NRD8 1548 aa26.31■■□□□ 1.8
PHGDH-213ENST00000641272 UGGT1Q9NYU2 1555 aa26.31■■□□□ 1.8
PHGDH-213ENST00000641272 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
PHGDH-213ENST00000641272 SPATA31D1Q6ZQQ2 1576 aa26.29■■□□□ 1.8
PHGDH-213ENST00000641272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.29■■□□□ 1.8
PHGDH-213ENST00000641272 SHANK2Q9UPX8 1470 aa26.29■■□□□ 1.8
PHGDH-213ENST00000641272 ERVK-7P63135 1459 aa26.28■■□□□ 1.8
PHGDH-213ENST00000641272 CFAP65Q6ZU64 1925 aaKnown RBP26.27■■□□□ 1.8
PHGDH-213ENST00000641272 APLP2Q06481 763 aa26.27■■□□□ 1.8
PHGDH-213ENST00000641272 KIF15Q9NS87 1388 aa26.27■■□□□ 1.8
PHGDH-213ENST00000641272 ABCC5O15440 1437 aa26.26■■□□□ 1.79
PHGDH-213ENST00000641272 PRDM15P57071 1507 aaPredicted RBP26.25■■□□□ 1.79
PHGDH-213ENST00000641272 DAPK1P53355 1430 aa26.24■■□□□ 1.79
PHGDH-213ENST00000641272 FGD6Q6ZV73 1430 aa26.24■■□□□ 1.79
PHGDH-213ENST00000641272 DISP3Q9P2K9 1392 aa26.22■■□□□ 1.79
PHGDH-213ENST00000641272 IQGAP1P46940 1657 aa26.22■■□□□ 1.79
PHGDH-213ENST00000641272 DEPDC5O75140 1603 aa26.21■■□□□ 1.79
PHGDH-213ENST00000641272 UBAP1LF5GYI3 381 aa26.21■■□□□ 1.79
PHGDH-213ENST00000641272 ERBINQ96RT1 1412 aa26.21■■□□□ 1.79
PHGDH-213ENST00000641272 VWDEQ8N2E2 1590 aa26.2■■□□□ 1.78
PHGDH-213ENST00000641272 UBR1Q8IWV7 1749 aa26.19■■□□□ 1.78
PHGDH-213ENST00000641272 RRP7BPQ9NSQ0 103 aa26.19■■□□□ 1.78
PHGDH-213ENST00000641272 NPHP4O75161 1426 aaPredicted RBP26.19■■□□□ 1.78
PHGDH-213ENST00000641272 CPS1P31327 1500 aa26.17■■□□□ 1.78
PHGDH-213ENST00000641272 ANKLE2Q86XL3 938 aa26.16■■□□□ 1.78
PHGDH-213ENST00000641272 THEMISQ8N1K5 641 aaPredicted RBP26.16■■□□□ 1.78
PHGDH-213ENST00000641272 MED14O60244 1454 aa26.14■■□□□ 1.78
PHGDH-213ENST00000641272 CHIC2Q9UKJ5 165 aa26.13■■□□□ 1.77
PHGDH-213ENST00000641272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.12■■□□□ 1.775e-16■■□□□ 13.6
PHGDH-213ENST00000641272 STRCP1A6NGW2 1772 aa26.12■■□□□ 1.77
PHGDH-213ENST00000641272 PIK3C2BO00750 1634 aa26.1■■□□□ 1.77
PHGDH-213ENST00000641272 SCAF1Q9H7N4 1312 aaKnown RBP26.09■■□□□ 1.77
PHGDH-213ENST00000641272 ANKRD30AQ9BXX3 1397 aa26.07■■□□□ 1.76
PHGDH-213ENST00000641272 ARHGAP31Q2M1Z3 1444 aa26.07■■□□□ 1.76
PHGDH-213ENST00000641272 ILDR2Q71H61 639 aa26.06■■□□□ 1.76
PHGDH-213ENST00000641272 SYNMO15061 1565 aa26.05■■□□□ 1.76
PHGDH-213ENST00000641272 SCAF11Q99590 1463 aaKnown RBP26.04■■□□□ 1.76
PHGDH-213ENST00000641272 PIP4K2BP78356 416 aa26.04■■□□□ 1.76
PHGDH-213ENST00000641272 KANK1Q14678 1352 aa26.04■■□□□ 1.76
PHGDH-213ENST00000641272 ADGRL2O95490 1459 aa26.02■■□□□ 1.76
PHGDH-213ENST00000641272 ARHGAP23Q9P227 1491 aa26.02■■□□□ 1.76
PHGDH-213ENST00000641272 SLIT1O75093 1534 aa26.02■■□□□ 1.76
PHGDH-213ENST00000641272 EFCAB6Q5THR3 1501 aa26.02■■□□□ 1.76
PHGDH-213ENST00000641272 LMTK2Q8IWU2 1503 aa26.02■■□□□ 1.76
PHGDH-213ENST00000641272 FAM50AQ14320 339 aaKnown RBP26.01■■□□□ 1.75
PHGDH-213ENST00000641272 ALKQ9UM73 1620 aa26.01■■□□□ 1.75
PHGDH-213ENST00000641272 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
PHGDH-213ENST00000641272 LTKP29376 864 aa25.95■■□□□ 1.74
PHGDH-213ENST00000641272 TOM1O60784 492 aa25.94■■□□□ 1.74
PHGDH-213ENST00000641272 KDM5AP29375 1690 aaKnown RBP25.93■■□□□ 1.74
PHGDH-213ENST00000641272 HSPA1LP34931 641 aa25.93■■□□□ 1.74
PHGDH-213ENST00000641272 ADGRB3O60242 1522 aa25.93■■□□□ 1.74
PHGDH-213ENST00000641272 TXNDC2Q86VQ3 553 aa25.92■■□□□ 1.74
PHGDH-213ENST00000641272 ANKRD50Q9ULJ7 1429 aa25.91■■□□□ 1.74
PHGDH-213ENST00000641272 STAG3Q9UJ98 1225 aa25.91■■□□□ 1.74
PHGDH-213ENST00000641272 XIRP1Q702N8 1843 aaKnown RBP25.91■■□□□ 1.74
PHGDH-213ENST00000641272 MED1Q15648 1581 aaPredicted RBP25.9■■□□□ 1.74
PHGDH-213ENST00000641272 TMEM2Q9UHN6 1383 aa25.9■■□□□ 1.74
PHGDH-213ENST00000641272 SENP3Q9H4L4 574 aaPredicted RBP25.89■■□□□ 1.74
PHGDH-213ENST00000641272 TET3O43151 1660 aa25.89■■□□□ 1.73
PHGDH-213ENST00000641272 NOS1P29475 1434 aa25.88■■□□□ 1.73
PHGDH-213ENST00000641272 MYO5BQ9ULV0 1848 aa25.88■■□□□ 1.73
PHGDH-213ENST00000641272 GCC2Q8IWJ2 1684 aa25.87■■□□□ 1.73
PHGDH-213ENST00000641272 UNC13BO14795 1591 aa25.87■■□□□ 1.73
PHGDH-213ENST00000641272 EID1Q9Y6B2 187 aa25.87■■□□□ 1.73
PHGDH-213ENST00000641272 IDI1Q13907 227 aa25.85■■□□□ 1.73
PHGDH-213ENST00000641272 SOCS7O14512 581 aa25.81■■□□□ 1.72
PHGDH-213ENST00000641272 RPRD2Q5VT52 1461 aaKnown RBP25.8■■□□□ 1.72
PHGDH-213ENST00000641272 E9PCH4 1651 aa25.8■■□□□ 1.72
PHGDH-213ENST00000641272 PPARGC1BQ86YN6 1023 aaKnown RBP25.78■■□□□ 1.72
PHGDH-213ENST00000641272 SLC26A8Q96RN1 970 aa25.76■■□□□ 1.71
PHGDH-213ENST00000641272 IQGAP3Q86VI3 1631 aa25.76■■□□□ 1.71
PHGDH-213ENST00000641272 TMEM131LA2VDJ0 1609 aa25.74■■□□□ 1.71
PHGDH-213ENST00000641272 NWD1Q149M9 1564 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms