RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 LMOD3Q0VAK6 560 aa24.49■■□□□ 1.51
KCNMA1-293ENST00000640969 TPM3P06753 285 aa24.48■■□□□ 1.51
KCNMA1-293ENST00000640969 FMN1Q68DA7 1419 aa24.47■■□□□ 1.51
KCNMA1-293ENST00000640969 TOMM22Q9NS69 142 aa24.46■■□□□ 1.51
KCNMA1-293ENST00000640969 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
KCNMA1-293ENST00000640969 L3MBTL2Q969R5 705 aa24.46■■□□□ 1.51
KCNMA1-293ENST00000640969 SF3A1Q15459 793 aaKnown RBP24.45■■□□□ 1.51
KCNMA1-293ENST00000640969 KIF3AQ9Y496 699 aa24.44■■□□□ 1.5
KCNMA1-293ENST00000640969 PHLDB1Q86UU1 1377 aa24.43■■□□□ 1.5
KCNMA1-293ENST00000640969 PRM3Q9NNZ6 103 aa24.43■■□□□ 1.5
KCNMA1-293ENST00000640969 NUTM2DQ5VT03 806 aaPredicted RBP24.42■■□□□ 1.5
KCNMA1-293ENST00000640969 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
KCNMA1-293ENST00000640969 RRP7AQ9Y3A4 280 aaKnown RBP24.41■■□□□ 1.5
KCNMA1-293ENST00000640969 KIF15Q9NS87 1388 aa24.41■■□□□ 1.5
KCNMA1-293ENST00000640969 USP35Q9P2H5 1018 aa24.41■■□□□ 1.5
KCNMA1-293ENST00000640969 AMPHP49418 695 aa24.4■■□□□ 1.5
KCNMA1-293ENST00000640969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.4■■□□□ 1.5
KCNMA1-293ENST00000640969 H3BQV1 296 aa24.4■■□□□ 1.5
KCNMA1-293ENST00000640969 IFFO2Q5TF58 517 aa24.4■■□□□ 1.5
KCNMA1-293ENST00000640969 CENPQQ7L2Z9 268 aaPredicted RBP24.4■■□□□ 1.5
KCNMA1-293ENST00000640969 KIF3BO15066 747 aa24.39■■□□□ 1.49
KCNMA1-293ENST00000640969 RILPL2Q969X0 211 aa24.39■■□□□ 1.49
KCNMA1-293ENST00000640969 NGDNQ8NEJ9 315 aaKnown RBP24.39■■□□□ 1.49
KCNMA1-293ENST00000640969 CCDC9Q9Y3X0 531 aaKnown RBP24.39■■□□□ 1.49
KCNMA1-293ENST00000640969 MYBBP1AQ9BQG0 1328 aaKnown RBP24.38■■□□□ 1.49
KCNMA1-293ENST00000640969 CEP89Q96ST8 783 aa24.38■■□□□ 1.49
KCNMA1-293ENST00000640969 FAM161AQ3B820 660 aa24.38■■□□□ 1.49
KCNMA1-293ENST00000640969 LTV1Q96GA3 475 aaPredicted RBP24.38■■□□□ 1.49
KCNMA1-293ENST00000640969 SLC4A3P48751 1232 aa24.37■■□□□ 1.49
KCNMA1-293ENST00000640969 HSP90AA2PQ14568 343 aaPredicted RBP24.37■■□□□ 1.49
KCNMA1-293ENST00000640969 DDX49Q9Y6V7 483 aaKnown RBP24.37■■□□□ 1.49
KCNMA1-293ENST00000640969 MARCH6O60337 910 aa24.37■■□□□ 1.49
KCNMA1-293ENST00000640969 G3V3G9 751 aa24.37■■□□□ 1.49
KCNMA1-293ENST00000640969 PES1O00541 588 aaKnown RBP24.37■■□□□ 1.49
KCNMA1-293ENST00000640969 DCAF8Q5TAQ9 597 aa24.37■■□□□ 1.49
KCNMA1-293ENST00000640969 PDE4AP27815 886 aa24.36■■□□□ 1.49
KCNMA1-293ENST00000640969 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
KCNMA1-293ENST00000640969 TPD52L1Q16890 204 aaPredicted RBP24.36■■□□□ 1.49
KCNMA1-293ENST00000640969 ANKRD45Q5TZF3 282 aa24.36■■□□□ 1.49
KCNMA1-293ENST00000640969 VPS53Q5VIR6 699 aa24.35■■□□□ 1.49
KCNMA1-293ENST00000640969 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
KCNMA1-293ENST00000640969 HNRNPMP52272 730 aaKnown RBP eCLIP24.35■■□□□ 1.49
KCNMA1-293ENST00000640969 FRAT2O75474 233 aaPredicted RBP24.35■■□□□ 1.49
KCNMA1-293ENST00000640969 FAM184AQ8NB25 1140 aa24.34■■□□□ 1.49
KCNMA1-293ENST00000640969 PLIN1O60240 522 aa24.33■■□□□ 1.49
KCNMA1-293ENST00000640969 SKOR2Q2VWA4 1001 aaPredicted RBP24.33■■□□□ 1.49
KCNMA1-293ENST00000640969 GOLGA6L19H0YKK7 550 aa24.33■■□□□ 1.49
KCNMA1-293ENST00000640969 FOXD4L6Q3SYB3 417 aaPredicted RBP24.33■■□□□ 1.49
KCNMA1-293ENST00000640969 FOXD4L3Q6VB84 417 aaPredicted RBP24.33■■□□□ 1.49
KCNMA1-293ENST00000640969 BCL2L13Q9BXK5 485 aa24.33■■□□□ 1.49
KCNMA1-293ENST00000640969 RSPH6AQ9H0K4 717 aa24.32■■□□□ 1.48
KCNMA1-293ENST00000640969 GSE1Q14687 1217 aa24.31■■□□□ 1.48
KCNMA1-293ENST00000640969 ATP6V1DQ9Y5K8 247 aa24.31■■□□□ 1.48
KCNMA1-293ENST00000640969 CCAR2Q8N163 923 aaKnown RBP24.3■■□□□ 1.48
KCNMA1-293ENST00000640969 PANK3Q9H999 370 aa24.3■■□□□ 1.48
KCNMA1-293ENST00000640969 ELL2O00472 640 aaPredicted RBP24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 EXOC6Q8TAG9 804 aa24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 TSR1Q2NL82 804 aaKnown RBP24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 TRAK1Q9UPV9 953 aa24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 BECN2A8MW95 431 aa24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 RRP1P56182 461 aaKnown RBP24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 EID1Q9Y6B2 187 aa24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 ZKSCAN2Q63HK3 967 aa24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 CRBNQ96SW2 442 aa24.29■■□□□ 1.48
KCNMA1-293ENST00000640969 NUTM2FA1L443 756 aa24.27■■□□□ 1.48
KCNMA1-293ENST00000640969 E9PSI1 815 aa24.26■■□□□ 1.47
KCNMA1-293ENST00000640969 GTF2E1P29083 439 aaPredicted RBP24.26■■□□□ 1.47
KCNMA1-293ENST00000640969 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
KCNMA1-293ENST00000640969 SETQ01105 290 aaPredicted RBP24.25■■□□□ 1.47
KCNMA1-293ENST00000640969 CHMP4CQ96CF2 233 aa24.25■■□□□ 1.47
KCNMA1-293ENST00000640969 AKAP17AQ02040 695 aaKnown RBP24.24■■□□□ 1.47
KCNMA1-293ENST00000640969 ST20-MTHFSA0A0A6YYL1 179 aa24.24■■□□□ 1.47
KCNMA1-293ENST00000640969 MCTP1Q6DN14 999 aa24.24■■□□□ 1.47
KCNMA1-293ENST00000640969 TPM2P07951 284 aa24.23■■□□□ 1.47
KCNMA1-293ENST00000640969 TPM1P09493 284 aa24.23■■□□□ 1.47
KCNMA1-293ENST00000640969 CCDC88BA6NC98 1476 aa24.23■■□□□ 1.47
KCNMA1-293ENST00000640969 ANO8Q9HCE9 1232 aaPredicted RBP24.23■■□□□ 1.47
KCNMA1-293ENST00000640969 DIAPH3Q9NSV4 1193 aa24.23■■□□□ 1.47
KCNMA1-293ENST00000640969 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
KCNMA1-293ENST00000640969 ZNF592Q92610 1267 aa24.21■■□□□ 1.47
KCNMA1-293ENST00000640969 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
KCNMA1-293ENST00000640969 SYNE3Q6ZMZ3 975 aa24.19■■□□□ 1.46
KCNMA1-293ENST00000640969 CCDC70Q6NSX1 233 aa24.19■■□□□ 1.46
KCNMA1-293ENST00000640969 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
KCNMA1-293ENST00000640969 CGNL1Q0VF96 1302 aa24.19■■□□□ 1.46
KCNMA1-293ENST00000640969 GPS2Q13227 327 aa24.18■■□□□ 1.46
KCNMA1-293ENST00000640969 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
KCNMA1-293ENST00000640969 C1orf141Q5JVX7 400 aa24.18■■□□□ 1.46
KCNMA1-293ENST00000640969 ZBED9Q6R2W3 1325 aa24.17■■□□□ 1.46
KCNMA1-293ENST00000640969 COG3Q96JB2 828 aa24.17■■□□□ 1.46
KCNMA1-293ENST00000640969 CCDC144AA2RUR9 1427 aa24.17■■□□□ 1.46
KCNMA1-293ENST00000640969 RSPH4AQ5TD94 716 aa24.16■■□□□ 1.46
KCNMA1-293ENST00000640969 ANO2Q9NQ90 1003 aa24.16■■□□□ 1.46
KCNMA1-293ENST00000640969 RUFY2Q8WXA3 655 aa24.15■■□□□ 1.46
KCNMA1-293ENST00000640969 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
KCNMA1-293ENST00000640969 REC8O95072 547 aa24.15■■□□□ 1.46
KCNMA1-293ENST00000640969 ZNF771Q7L3S4 317 aaPredicted RBP24.14■■□□□ 1.45
KCNMA1-293ENST00000640969 TRIM29Q14134 588 aa24.13■■□□□ 1.45
KCNMA1-293ENST00000640969 PCMTD1Q96MG8 357 aaPredicted RBP24.13■■□□□ 1.45
KCNMA1-293ENST00000640969 ZKSCAN1P17029 563 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms