RNA–Protein interactions for RNA: ENST00000640946.1

PRICKLE1-221, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 2

Gene PRICKLE1, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-221ENST00000640946 ARHGEF5Q12774 1597 aa12.28□□□□□ -0.44
PRICKLE1-221ENST00000640946 UBAP1LF5GYI3 381 aa12.28□□□□□ -0.44
PRICKLE1-221ENST00000640946 MED1Q15648 1581 aaPredicted RBP12.27□□□□□ -0.44
PRICKLE1-221ENST00000640946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.45
PRICKLE1-221ENST00000640946 ATP7AQ04656 1500 aa12.27□□□□□ -0.45
PRICKLE1-221ENST00000640946 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
PRICKLE1-221ENST00000640946 RTEL1-TNFRSF6BF6WH68 1400 aa12.26□□□□□ -0.45
PRICKLE1-221ENST00000640946 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
PRICKLE1-221ENST00000640946 ALKQ9UM73 1620 aa12.26□□□□□ -0.45
PRICKLE1-221ENST00000640946 PKD2Q13563 968 aa12.25□□□□□ -0.45
PRICKLE1-221ENST00000640946 CCDC141Q6ZP82 1450 aa12.25□□□□□ -0.45
PRICKLE1-221ENST00000640946 DNMT1P26358 1616 aaKnown RBP12.25□□□□□ -0.45
PRICKLE1-221ENST00000640946 A2MP01023 1474 aa12.24□□□□□ -0.45
PRICKLE1-221ENST00000640946 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
PRICKLE1-221ENST00000640946 RRBP1Q9P2E9 1410 aaKnown RBP12.23□□□□□ -0.45
PRICKLE1-221ENST00000640946 SPAG9O60271 1321 aaKnown RBP12.23□□□□□ -0.45
PRICKLE1-221ENST00000640946 HSPA1LP34931 641 aa12.23□□□□□ -0.45
PRICKLE1-221ENST00000640946 ABCC5O15440 1437 aa12.22□□□□□ -0.45
PRICKLE1-221ENST00000640946 POLR1AO95602 1720 aaPredicted RBP12.22□□□□□ -0.45
PRICKLE1-221ENST00000640946 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
PRICKLE1-221ENST00000640946 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.45
PRICKLE1-221ENST00000640946 TSPY4P0CV99 314 aa12.21□□□□□ -0.45
PRICKLE1-221ENST00000640946 TSPY10P0CW01 314 aa12.21□□□□□ -0.45
PRICKLE1-221ENST00000640946 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.46
PRICKLE1-221ENST00000640946 ADGBQ8N7X0 1667 aa12.2□□□□□ -0.46
PRICKLE1-221ENST00000640946 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
PRICKLE1-221ENST00000640946 DAPK1P53355 1430 aa12.2□□□□□ -0.46
PRICKLE1-221ENST00000640946 VWDEQ8N2E2 1590 aa12.19□□□□□ -0.46
PRICKLE1-221ENST00000640946 CPS1P31327 1500 aa12.18□□□□□ -0.46
PRICKLE1-221ENST00000640946 GGT6Q6P531 493 aa12.18□□□□□ -0.46
PRICKLE1-221ENST00000640946 CROCC2H7BZ55 1655 aa12.16□□□□□ -0.46
PRICKLE1-221ENST00000640946 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
PRICKLE1-221ENST00000640946 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
PRICKLE1-221ENST00000640946 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
PRICKLE1-221ENST00000640946 DHX29Q7Z478 1369 aaKnown RBP12.16□□□□□ -0.46
PRICKLE1-221ENST00000640946 ADGRL2O95490 1459 aa12.15□□□□□ -0.46
PRICKLE1-221ENST00000640946 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
PRICKLE1-221ENST00000640946 PZPP20742 1482 aa12.14□□□□□ -0.47
PRICKLE1-221ENST00000640946 ROCK1Q13464 1354 aa12.13□□□□□ -0.47
PRICKLE1-221ENST00000640946 TNRQ92752 1358 aa12.13□□□□□ -0.47
PRICKLE1-221ENST00000640946 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
PRICKLE1-221ENST00000640946 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
PRICKLE1-221ENST00000640946 TOM1O60784 492 aa12.12□□□□□ -0.47
PRICKLE1-221ENST00000640946 ANKRD30AQ9BXX3 1397 aa12.12□□□□□ -0.47
PRICKLE1-221ENST00000640946 MED14O60244 1454 aa12.12□□□□□ -0.47
PRICKLE1-221ENST00000640946 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
PRICKLE1-221ENST00000640946 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
PRICKLE1-221ENST00000640946 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
PRICKLE1-221ENST00000640946 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
PRICKLE1-221ENST00000640946 LRRC7Q96NW7 1537 aa12.09□□□□□ -0.47
PRICKLE1-221ENST00000640946 NPHP4O75161 1426 aaPredicted RBP12.09□□□□□ -0.47
PRICKLE1-221ENST00000640946 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
PRICKLE1-221ENST00000640946 RRP7BPQ9NSQ0 103 aa12.08□□□□□ -0.48
PRICKLE1-221ENST00000640946 RGS17Q9UGC6 210 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-221ENST00000640946 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
PRICKLE1-221ENST00000640946 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
PRICKLE1-221ENST00000640946 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
PRICKLE1-221ENST00000640946 ZC3H13Q5T200 1668 aaKnown RBP12.07□□□□□ -0.48
PRICKLE1-221ENST00000640946 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
PRICKLE1-221ENST00000640946 EIF2AK4Q9P2K8 1649 aaKnown RBP12.07□□□□□ -0.48
PRICKLE1-221ENST00000640946 NLRP1Q9C000 1473 aa12.07□□□□□ -0.48
PRICKLE1-221ENST00000640946 KIF3BO15066 747 aa12.06□□□□□ -0.48
PRICKLE1-221ENST00000640946 ANKLE2Q86XL3 938 aa12.06□□□□□ -0.48
PRICKLE1-221ENST00000640946 SYNMO15061 1565 aa12.05□□□□□ -0.48
PRICKLE1-221ENST00000640946 XIRP1Q702N8 1843 aaKnown RBP12.05□□□□□ -0.48
PRICKLE1-221ENST00000640946 ANKRD50Q9ULJ7 1429 aa12.04□□□□□ -0.48
PRICKLE1-221ENST00000640946 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
PRICKLE1-221ENST00000640946 PHF23Q9BUL5 403 aaPredicted RBP12.03□□□□□ -0.48
PRICKLE1-221ENST00000640946 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
PRICKLE1-221ENST00000640946 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
PRICKLE1-221ENST00000640946 NAIPQ13075 1403 aa12.03□□□□□ -0.48
PRICKLE1-221ENST00000640946 ABCC3O15438 1527 aa12.02□□□□□ -0.48
PRICKLE1-221ENST00000640946 MROH1Q8NDA8 1641 aa12.02□□□□□ -0.49
PRICKLE1-221ENST00000640946 ITGAEP38570 1179 aa12.02□□□□□ -0.49
PRICKLE1-221ENST00000640946 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
PRICKLE1-221ENST00000640946 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
PRICKLE1-221ENST00000640946 ERVK-7P63135 1459 aa12□□□□□ -0.49
PRICKLE1-221ENST00000640946 PRDM15P57071 1507 aaPredicted RBP12□□□□□ -0.49
PRICKLE1-221ENST00000640946 CEP152O94986 1710 aa11.97□□□□□ -0.49
PRICKLE1-221ENST00000640946 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
PRICKLE1-221ENST00000640946 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
PRICKLE1-221ENST00000640946 SLIT1O75093 1534 aa11.96□□□□□ -0.49
PRICKLE1-221ENST00000640946 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.49
PRICKLE1-221ENST00000640946 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.49
PRICKLE1-221ENST00000640946 ACIN1Q9UKV3 1341 aaKnown RBP11.96□□□□□ -0.49
PRICKLE1-221ENST00000640946 LTKP29376 864 aa11.96□□□□□ -0.49
PRICKLE1-221ENST00000640946 POTEAQ6S8J7 498 aa11.96□□□□□ -0.49
PRICKLE1-221ENST00000640946 UNC13BO14795 1591 aa11.96□□□□□ -0.5
PRICKLE1-221ENST00000640946 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
PRICKLE1-221ENST00000640946 HRCP23327 699 aa11.95□□□□□ -0.5
PRICKLE1-221ENST00000640946 CFAP65Q6ZU64 1925 aaKnown RBP11.94□□□□□ -0.5
PRICKLE1-221ENST00000640946 KANK1Q14678 1352 aa11.93□□□□□ -0.5
PRICKLE1-221ENST00000640946 SETD1AO15047 1707 aaKnown RBP11.93□□□□□ -0.5
PRICKLE1-221ENST00000640946 SETD5Q9C0A6 1442 aa11.93□□□□□ -0.5
PRICKLE1-221ENST00000640946 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
PRICKLE1-221ENST00000640946 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
PRICKLE1-221ENST00000640946 ROBO1Q9Y6N7 1651 aa11.91□□□□□ -0.5
PRICKLE1-221ENST00000640946 PIK3C2BO00750 1634 aa11.91□□□□□ -0.5
PRICKLE1-221ENST00000640946 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
PRICKLE1-221ENST00000640946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms