RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 WASHC2CQ9Y4E1 1318 aa10.8□□□□□ -0.68
RTTN-223ENST00000640931 NBR1Q14596 966 aa10.79□□□□□ -0.68
RTTN-223ENST00000640931 FBXO41Q8TF61 875 aa10.79□□□□□ -0.68
RTTN-223ENST00000640931 BRD2P25440 801 aaKnown RBP10.78□□□□□ -0.68
RTTN-223ENST00000640931 TONSLQ96HA7 1378 aa10.77□□□□□ -0.68
RTTN-223ENST00000640931 WASHC2AQ641Q2 1341 aa10.77□□□□□ -0.68
RTTN-223ENST00000640931 NCOA1Q15788 1441 aa10.77□□□□□ -0.69
RTTN-223ENST00000640931 TTC37Q6PGP7 1564 aa10.77□□□□□ -0.69
RTTN-223ENST00000640931 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
RTTN-223ENST00000640931 RRP9O43818 475 aaKnown RBP10.77□□□□□ -0.69
RTTN-223ENST00000640931 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
RTTN-223ENST00000640931 ITSN2Q9NZM3 1697 aa10.76□□□□□ -0.69
RTTN-223ENST00000640931 ROCK1Q13464 1354 aa10.76□□□□□ -0.69
RTTN-223ENST00000640931 SOCS7O14512 581 aa10.75□□□□□ -0.69
RTTN-223ENST00000640931 ABCC2Q92887 1545 aa10.75□□□□□ -0.69
RTTN-223ENST00000640931 DDX10Q13206 875 aaKnown RBP10.75□□□□□ -0.69
RTTN-223ENST00000640931 LMTK3Q96Q04 1460 aa10.75□□□□□ -0.69
RTTN-223ENST00000640931 SAMD9LQ8IVG5 1584 aa10.74□□□□□ -0.69
RTTN-223ENST00000640931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.74□□□□□ -0.69
RTTN-223ENST00000640931 CDC42BPBQ9Y5S2 1711 aa10.74□□□□□ -0.69
RTTN-223ENST00000640931 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
RTTN-223ENST00000640931 DSG3P32926 999 aa10.73□□□□□ -0.69
RTTN-223ENST00000640931 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
RTTN-223ENST00000640931 PZPP20742 1482 aa10.73□□□□□ -0.69
RTTN-223ENST00000640931 C9orf84Q5VXU9 1444 aa10.73□□□□□ -0.69
RTTN-223ENST00000640931 MBD5Q9P267 1494 aa10.72□□□□□ -0.69
RTTN-223ENST00000640931 FAM43AQ8N2R8 423 aa10.72□□□□□ -0.69
RTTN-223ENST00000640931 USP35Q9P2H5 1018 aa10.72□□□□□ -0.69
RTTN-223ENST00000640931 ZCCHC11Q5TAX3 1644 aaKnown RBP10.72□□□□□ -0.69
RTTN-223ENST00000640931 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
RTTN-223ENST00000640931 ANKRD30BQ9BXX2 1392 aa10.72□□□□□ -0.69
RTTN-223ENST00000640931 PKD2Q13563 968 aa10.71□□□□□ -0.69
RTTN-223ENST00000640931 NBPF8Q3BBV2 869 aa10.71□□□□□ -0.69
RTTN-223ENST00000640931 ARHGAP5Q13017 1502 aa10.71□□□□□ -0.7
RTTN-223ENST00000640931 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.7
RTTN-223ENST00000640931 ARHGEF12Q9NZN5 1544 aa10.71□□□□□ -0.7
RTTN-223ENST00000640931 ANKRD30AQ9BXX3 1397 aa10.71□□□□□ -0.7
RTTN-223ENST00000640931 HSP90AA2PQ14568 343 aaPredicted RBP10.7□□□□□ -0.7
RTTN-223ENST00000640931 ANKRD50Q9ULJ7 1429 aa10.7□□□□□ -0.7
RTTN-223ENST00000640931 KDM4FA0A1W2PPD8 638 aa10.7□□□□□ -0.7
RTTN-223ENST00000640931 TSPY4P0CV99 314 aa10.7□□□□□ -0.7
RTTN-223ENST00000640931 TSPY10P0CW01 314 aa10.7□□□□□ -0.7
RTTN-223ENST00000640931 NAP1L5Q96NT1 182 aaPredicted RBP10.7□□□□□ -0.7
RTTN-223ENST00000640931 ADGRL2O95490 1459 aa10.7□□□□□ -0.7
RTTN-223ENST00000640931 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
RTTN-223ENST00000640931 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
RTTN-223ENST00000640931 CAPN15O75808 1086 aa10.69□□□□□ -0.7
RTTN-223ENST00000640931 CHMP4AQ9BY43 222 aa10.69□□□□□ -0.7
RTTN-223ENST00000640931 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
RTTN-223ENST00000640931 NAP1L2Q9ULW6 460 aaPredicted RBP10.69□□□□□ -0.7
RTTN-223ENST00000640931 NUP155O75694 1391 aa10.68□□□□□ -0.7
RTTN-223ENST00000640931 KIF15Q9NS87 1388 aa10.68□□□□□ -0.7
RTTN-223ENST00000640931 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
RTTN-223ENST00000640931 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
RTTN-223ENST00000640931 CCDC141Q6ZP82 1450 aa10.65□□□□□ -0.7
RTTN-223ENST00000640931 AFAP1Q8N556 730 aa10.65□□□□□ -0.7
RTTN-223ENST00000640931 TRAPPC8Q9Y2L5 1435 aa10.65□□□□□ -0.7
RTTN-223ENST00000640931 UHRF1BP1LA0JNW5 1464 aa10.65□□□□□ -0.7
RTTN-223ENST00000640931 IPO4Q8TEX9 1081 aaKnown RBP10.65□□□□□ -0.7
RTTN-223ENST00000640931 CALD1Q05682 793 aaKnown RBP10.64□□□□□ -0.71
RTTN-223ENST00000640931 ARHGEF5Q12774 1597 aa10.63□□□□□ -0.71
RTTN-223ENST00000640931 RPRD2Q5VT52 1461 aaKnown RBP10.63□□□□□ -0.71
RTTN-223ENST00000640931 SHANK2Q9UPX8 1470 aa10.63□□□□□ -0.71
RTTN-223ENST00000640931 PLCH2O75038 1416 aa10.63□□□□□ -0.71
RTTN-223ENST00000640931 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
RTTN-223ENST00000640931 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
RTTN-223ENST00000640931 PLEKHH2Q8IVE3 1493 aa10.63□□□□□ -0.71
RTTN-223ENST00000640931 TEX14Q8IWB6 1497 aa10.63□□□□□ -0.71
RTTN-223ENST00000640931 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
RTTN-223ENST00000640931 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
RTTN-223ENST00000640931 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
RTTN-223ENST00000640931 MYO5CQ9NQX4 1742 aa10.62□□□□□ -0.71
RTTN-223ENST00000640931 DHX37Q8IY37 1157 aaKnown RBP10.62□□□□□ -0.71
RTTN-223ENST00000640931 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
RTTN-223ENST00000640931 CENPJQ9HC77 1338 aaPredicted RBP10.61□□□□□ -0.71
RTTN-223ENST00000640931 EFCAB2Q5VUJ9 269 aa10.61□□□□□ -0.71
RTTN-223ENST00000640931 PRDM4Q9UKN5 801 aa10.61□□□□□ -0.71
RTTN-223ENST00000640931 ASXL2Q76L83 1435 aa10.61□□□□□ -0.71
RTTN-223ENST00000640931 WDR7Q9Y4E6 1490 aa10.6□□□□□ -0.71
RTTN-223ENST00000640931 HSP90AA1P07900 732 aaKnown RBP10.59□□□□□ -0.71
RTTN-223ENST00000640931 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
RTTN-223ENST00000640931 NEFMP07197 916 aa10.59□□□□□ -0.71
RTTN-223ENST00000640931 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
RTTN-223ENST00000640931 ABCC1P33527 1531 aa10.57□□□□□ -0.72
RTTN-223ENST00000640931 RGL3Q3MIN7 710 aa10.57□□□□□ -0.72
RTTN-223ENST00000640931 IPO9Q96P70 1041 aaKnown RBP10.57□□□□□ -0.72
RTTN-223ENST00000640931 FAM135AQ9P2D6 1515 aa10.57□□□□□ -0.72
RTTN-223ENST00000640931 HECW2Q9P2P5 1572 aa10.57□□□□□ -0.72
RTTN-223ENST00000640931 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
RTTN-223ENST00000640931 CNGB1Q14028 1251 aaPredicted RBP10.56□□□□□ -0.72
RTTN-223ENST00000640931 BCCIPQ9P287 314 aaKnown RBP eCLIP10.56□□□□□ -0.72
RTTN-223ENST00000640931 SPAG9O60271 1321 aaKnown RBP10.55□□□□□ -0.72
RTTN-223ENST00000640931 CANXP27824 592 aaKnown RBP10.55□□□□□ -0.72
RTTN-223ENST00000640931 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
RTTN-223ENST00000640931 DCAF11Q8TEB1 546 aa10.55□□□□□ -0.72
RTTN-223ENST00000640931 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
RTTN-223ENST00000640931 PLA2R1Q13018 1463 aa10.55□□□□□ -0.72
RTTN-223ENST00000640931 MAST1Q9Y2H9 1570 aa10.54□□□□□ -0.72
RTTN-223ENST00000640931 POLR3GLQ9BT43 218 aa10.54□□□□□ -0.72
RTTN-223ENST00000640931 CHMP4BQ9H444 224 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms