RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 FBXO31Q5XUX0 539 aaPredicted RBP18.47■□□□□ 0.55
ERGIC3-220ENST00000640748 DNMT1P26358 1616 aaKnown RBP18.47■□□□□ 0.55
ERGIC3-220ENST00000640748 KDM5DQ9BY66 1539 aa18.45■□□□□ 0.54
ERGIC3-220ENST00000640748 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
ERGIC3-220ENST00000640748 PZPP20742 1482 aa18.45■□□□□ 0.54
ERGIC3-220ENST00000640748 TNRQ92752 1358 aa18.44■□□□□ 0.54
ERGIC3-220ENST00000640748 ARHGEF5Q12774 1597 aa18.44■□□□□ 0.54
ERGIC3-220ENST00000640748 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
ERGIC3-220ENST00000640748 LRRC9Q6ZRR7 1453 aa18.41■□□□□ 0.54
ERGIC3-220ENST00000640748 NEURL4Q96JN8 1562 aa18.41■□□□□ 0.54
ERGIC3-220ENST00000640748 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
ERGIC3-220ENST00000640748 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
ERGIC3-220ENST00000640748 SPATA31D1Q6ZQQ2 1576 aa18.4■□□□□ 0.54
ERGIC3-220ENST00000640748 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
ERGIC3-220ENST00000640748 MIA2Q96PC5 1412 aa18.38■□□□□ 0.53
ERGIC3-220ENST00000640748 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
ERGIC3-220ENST00000640748 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
ERGIC3-220ENST00000640748 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
ERGIC3-220ENST00000640748 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
ERGIC3-220ENST00000640748 RNF17Q9BXT8 1623 aaKnown RBP18.35■□□□□ 0.53
ERGIC3-220ENST00000640748 MAST1Q9Y2H9 1570 aa18.35■□□□□ 0.53
ERGIC3-220ENST00000640748 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
ERGIC3-220ENST00000640748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.53
ERGIC3-220ENST00000640748 SOCS7O14512 581 aa18.34■□□□□ 0.53
ERGIC3-220ENST00000640748 ABCC3O15438 1527 aa18.33■□□□□ 0.53
ERGIC3-220ENST00000640748 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
ERGIC3-220ENST00000640748 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
ERGIC3-220ENST00000640748 SHANK2Q9UPX8 1470 aa18.33■□□□□ 0.52
ERGIC3-220ENST00000640748 MROH1Q8NDA8 1641 aa18.32■□□□□ 0.52
ERGIC3-220ENST00000640748 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
ERGIC3-220ENST00000640748 VWDEQ8N2E2 1590 aa18.31■□□□□ 0.52
ERGIC3-220ENST00000640748 ANKLE2Q86XL3 938 aa18.31■□□□□ 0.52
ERGIC3-220ENST00000640748 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
ERGIC3-220ENST00000640748 CPS1P31327 1500 aa18.31■□□□□ 0.52
ERGIC3-220ENST00000640748 MED14O60244 1454 aa18.31■□□□□ 0.52
ERGIC3-220ENST00000640748 MYOM3Q5VTT5 1437 aa18.31■□□□□ 0.52
ERGIC3-220ENST00000640748 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
ERGIC3-220ENST00000640748 EIF2AK4Q9P2K8 1649 aaKnown RBP18.29■□□□□ 0.52
ERGIC3-220ENST00000640748 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
ERGIC3-220ENST00000640748 ERVK-7P63135 1459 aa18.28■□□□□ 0.52
ERGIC3-220ENST00000640748 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
ERGIC3-220ENST00000640748 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
ERGIC3-220ENST00000640748 ALKQ9UM73 1620 aa18.25■□□□□ 0.51
ERGIC3-220ENST00000640748 HSPA1LP34931 641 aa18.25■□□□□ 0.51
ERGIC3-220ENST00000640748 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
ERGIC3-220ENST00000640748 ABCC5O15440 1437 aa18.23■□□□□ 0.51
ERGIC3-220ENST00000640748 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
ERGIC3-220ENST00000640748 TOM1O60784 492 aa18.22■□□□□ 0.51
ERGIC3-220ENST00000640748 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
ERGIC3-220ENST00000640748 CEP152O94986 1710 aa18.22■□□□□ 0.51
ERGIC3-220ENST00000640748 APLP2Q06481 763 aa18.21■□□□□ 0.51
ERGIC3-220ENST00000640748 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
ERGIC3-220ENST00000640748 KIF15Q9NS87 1388 aa18.2■□□□□ 0.5
ERGIC3-220ENST00000640748 STRCP1A6NGW2 1772 aa18.2■□□□□ 0.5
ERGIC3-220ENST00000640748 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
ERGIC3-220ENST00000640748 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
ERGIC3-220ENST00000640748 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
ERGIC3-220ENST00000640748 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
ERGIC3-220ENST00000640748 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
ERGIC3-220ENST00000640748 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
ERGIC3-220ENST00000640748 LRRC7Q96NW7 1537 aa18.18■□□□□ 0.5
ERGIC3-220ENST00000640748 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
ERGIC3-220ENST00000640748 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
ERGIC3-220ENST00000640748 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
ERGIC3-220ENST00000640748 SCAF11Q99590 1463 aaKnown RBP18.16■□□□□ 0.5
ERGIC3-220ENST00000640748 LTKP29376 864 aa18.16■□□□□ 0.5
ERGIC3-220ENST00000640748 MED1Q15648 1581 aaPredicted RBP18.16■□□□□ 0.5
ERGIC3-220ENST00000640748 DAPK1P53355 1430 aa18.15■□□□□ 0.5
ERGIC3-220ENST00000640748 SLIT1O75093 1534 aa18.15■□□□□ 0.5
ERGIC3-220ENST00000640748 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
ERGIC3-220ENST00000640748 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
ERGIC3-220ENST00000640748 SYNMO15061 1565 aa18.12■□□□□ 0.49
ERGIC3-220ENST00000640748 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
ERGIC3-220ENST00000640748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.492e-10■■□□□ 13.5
ERGIC3-220ENST00000640748 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
ERGIC3-220ENST00000640748 LMTK2Q8IWU2 1503 aa18.08■□□□□ 0.49
ERGIC3-220ENST00000640748 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.49
ERGIC3-220ENST00000640748 CHIC2Q9UKJ5 165 aa18.07■□□□□ 0.48
ERGIC3-220ENST00000640748 ANKRD30AQ9BXX3 1397 aa18.06■□□□□ 0.48
ERGIC3-220ENST00000640748 IDI1Q13907 227 aa18.06■□□□□ 0.48
ERGIC3-220ENST00000640748 KANK1Q14678 1352 aa18.05■□□□□ 0.48
ERGIC3-220ENST00000640748 EID1Q9Y6B2 187 aa18.04■□□□□ 0.48
ERGIC3-220ENST00000640748 NOS1P29475 1434 aa18.04■□□□□ 0.48
ERGIC3-220ENST00000640748 EFCAB6Q5THR3 1501 aa18.03■□□□□ 0.48
ERGIC3-220ENST00000640748 XIRP1Q702N8 1843 aaKnown RBP18.03■□□□□ 0.48
ERGIC3-220ENST00000640748 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
ERGIC3-220ENST00000640748 ADGRL2O95490 1459 aa18.02■□□□□ 0.48
ERGIC3-220ENST00000640748 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
ERGIC3-220ENST00000640748 TET3O43151 1660 aa18.01■□□□□ 0.47
ERGIC3-220ENST00000640748 STAG3Q9UJ98 1225 aa17.99■□□□□ 0.47
ERGIC3-220ENST00000640748 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
ERGIC3-220ENST00000640748 TMEM94Q12767 1356 aa17.97■□□□□ 0.47
ERGIC3-220ENST00000640748 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
ERGIC3-220ENST00000640748 KCNA6P17658 529 aa17.96■□□□□ 0.47
ERGIC3-220ENST00000640748 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
ERGIC3-220ENST00000640748 FAM135BQ49AJ0 1406 aa17.95■□□□□ 0.46
ERGIC3-220ENST00000640748 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
ERGIC3-220ENST00000640748 FAM50AQ14320 339 aaKnown RBP17.94■□□□□ 0.46
ERGIC3-220ENST00000640748 SLC52A1Q9NWF4 448 aa17.94■□□□□ 0.46
ERGIC3-220ENST00000640748 RPRD2Q5VT52 1461 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms