RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 SCAPERQ9BY12 1400 aa9.43□□□□□ -0.9
NECAP1-226ENST00000640481 ABCA9Q8IUA7 1624 aa9.43□□□□□ -0.9
NECAP1-226ENST00000640481 PLA2R1Q13018 1463 aa9.43□□□□□ -0.9
NECAP1-226ENST00000640481 RTEL1-TNFRSF6BF6WH68 1400 aa9.43□□□□□ -0.9
NECAP1-226ENST00000640481 UHRF1BP1Q6BDS2 1440 aa9.42□□□□□ -0.9
NECAP1-226ENST00000640481 KIF7Q2M1P5 1343 aa9.42□□□□□ -0.9
NECAP1-226ENST00000640481 USP47Q96K76 1375 aa9.42□□□□□ -0.9
NECAP1-226ENST00000640481 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
NECAP1-226ENST00000640481 ADGRL1O94910 1474 aa9.42□□□□□ -0.9
NECAP1-226ENST00000640481 IQGAP3Q86VI3 1631 aa9.41□□□□□ -0.9
NECAP1-226ENST00000640481 ZFYVE16Q7Z3T8 1539 aa9.4□□□□□ -0.9
NECAP1-226ENST00000640481 CNTLNQ9NXG0 1405 aa9.4□□□□□ -0.9
NECAP1-226ENST00000640481 POLR3GLQ9BT43 218 aa9.4□□□□□ -0.9
NECAP1-226ENST00000640481 MAGI2Q86UL8 1455 aa9.4□□□□□ -0.9
NECAP1-226ENST00000640481 KIF3BO15066 747 aa9.39□□□□□ -0.91
NECAP1-226ENST00000640481 RALGAPBQ86X10 1494 aa9.39□□□□□ -0.91
NECAP1-226ENST00000640481 CD109Q6YHK3 1445 aa9.38□□□□□ -0.91
NECAP1-226ENST00000640481 ATP7AQ04656 1500 aa9.38□□□□□ -0.91
NECAP1-226ENST00000640481 ST20-MTHFSA0A0A6YYL1 179 aa9.38□□□□□ -0.91
NECAP1-226ENST00000640481 ROCK2O75116 1388 aaKnown RBP9.37□□□□□ -0.91
NECAP1-226ENST00000640481 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
NECAP1-226ENST00000640481 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
NECAP1-226ENST00000640481 CYB5RLQ6IPT4 315 aa9.37□□□□□ -0.91
NECAP1-226ENST00000640481 PRKRIP1Q9H875 184 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-226ENST00000640481 KDM5CP41229 1560 aa9.37□□□□□ -0.91
NECAP1-226ENST00000640481 ATP10AO60312 1499 aa9.37□□□□□ -0.91
NECAP1-226ENST00000640481 INO80Q9ULG1 1556 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-226ENST00000640481 A2MP01023 1474 aa9.36□□□□□ -0.91
NECAP1-226ENST00000640481 PRAG1Q86YV5 1406 aa9.36□□□□□ -0.91
NECAP1-226ENST00000640481 BCORL1Q5H9F3 1711 aa9.36□□□□□ -0.91
NECAP1-226ENST00000640481 KANK1Q14678 1352 aa9.35□□□□□ -0.91
NECAP1-226ENST00000640481 CCDC184Q52MB2 194 aa9.35□□□□□ -0.91
NECAP1-226ENST00000640481 CNGB1Q14028 1251 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-226ENST00000640481 ZNF518AQ6AHZ1 1483 aa9.34□□□□□ -0.91
NECAP1-226ENST00000640481 ARID4BQ4LE39 1312 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-226ENST00000640481 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-226ENST00000640481 E9PCH4 1651 aa9.34□□□□□ -0.92
NECAP1-226ENST00000640481 KIDINS220Q9ULH0 1771 aa9.33□□□□□ -0.92
NECAP1-226ENST00000640481 RAPGEF3O95398 923 aa9.32□□□□□ -0.92
NECAP1-226ENST00000640481 DEPDC5O75140 1603 aa9.32□□□□□ -0.92
NECAP1-226ENST00000640481 PTPRTO14522 1441 aa9.32□□□□□ -0.92
NECAP1-226ENST00000640481 TRPM1Q7Z4N2 1603 aa9.32□□□□□ -0.92
NECAP1-226ENST00000640481 HNRNPUQ00839 825 aaKnown RBP eCLIP9.31□□□□□ -0.92
NECAP1-226ENST00000640481 MRS2Q9HD23 443 aa9.31□□□□□ -0.92
NECAP1-226ENST00000640481 POGZQ7Z3K3 1410 aa9.31□□□□□ -0.92
NECAP1-226ENST00000640481 GGT6Q6P531 493 aa9.31□□□□□ -0.92
NECAP1-226ENST00000640481 GPRASP1Q5JY77 1395 aa9.3□□□□□ -0.92
NECAP1-226ENST00000640481 VWDEQ8N2E2 1590 aa9.3□□□□□ -0.92
NECAP1-226ENST00000640481 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-226ENST00000640481 TET3O43151 1660 aa9.3□□□□□ -0.92
NECAP1-226ENST00000640481 TRPM2O94759 1503 aa9.3□□□□□ -0.92
NECAP1-226ENST00000640481 FAM9BQ8IZU0 186 aa9.29□□□□□ -0.92
NECAP1-226ENST00000640481 MLH3Q9UHC1 1453 aa9.29□□□□□ -0.92
NECAP1-226ENST00000640481 MROH1Q8NDA8 1641 aa9.29□□□□□ -0.92
NECAP1-226ENST00000640481 EIF2AK4Q9P2K8 1649 aaKnown RBP9.29□□□□□ -0.92
NECAP1-226ENST00000640481 PRDM15P57071 1507 aaPredicted RBP9.29□□□□□ -0.92
NECAP1-226ENST00000640481 CFAP74Q9C0B2 1584 aa9.29□□□□□ -0.92
NECAP1-226ENST00000640481 SPHKAPQ2M3C7 1700 aa9.29□□□□□ -0.92
NECAP1-226ENST00000640481 SUPT16HQ9Y5B9 1047 aaKnown RBP9.28□□□□□ -0.92
NECAP1-226ENST00000640481 TESK2Q96S53 571 aa9.28□□□□□ -0.92
NECAP1-226ENST00000640481 NEO1Q92859 1461 aa9.28□□□□□ -0.92
NECAP1-226ENST00000640481 CLTCL1P53675 1640 aa9.28□□□□□ -0.92
NECAP1-226ENST00000640481 PRKCSHP14314 528 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-226ENST00000640481 STAC3Q96MF2 364 aa9.27□□□□□ -0.93
NECAP1-226ENST00000640481 FAM69CQ0P6D2 419 aa9.26□□□□□ -0.93
NECAP1-226ENST00000640481 WASHC2CQ9Y4E1 1318 aa9.26□□□□□ -0.93
NECAP1-226ENST00000640481 UGGT1Q9NYU2 1555 aa9.26□□□□□ -0.93
NECAP1-226ENST00000640481 HECW2Q9P2P5 1572 aa9.26□□□□□ -0.93
NECAP1-226ENST00000640481 FRMPD1Q5SYB0 1578 aa9.26□□□□□ -0.93
NECAP1-226ENST00000640481 CEP152O94986 1710 aa9.25□□□□□ -0.93
NECAP1-226ENST00000640481 RIMBP3CA6NJZ7 1639 aa9.25□□□□□ -0.93
NECAP1-226ENST00000640481 RIMBP3BA6NNM3 1639 aa9.25□□□□□ -0.93
NECAP1-226ENST00000640481 RIMBP3Q9UFD9 1639 aa9.25□□□□□ -0.93
NECAP1-226ENST00000640481 EFCAB6Q5THR3 1501 aa9.25□□□□□ -0.93
NECAP1-226ENST00000640481 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
NECAP1-226ENST00000640481 DISP3Q9P2K9 1392 aa9.25□□□□□ -0.93
NECAP1-226ENST00000640481 TMF1P82094 1093 aa9.24□□□□□ -0.93
NECAP1-226ENST00000640481 LAMC1P11047 1609 aa9.24□□□□□ -0.93
NECAP1-226ENST00000640481 PPRC1Q5VV67 1664 aaKnown RBP9.24□□□□□ -0.93
NECAP1-226ENST00000640481 LMTK2Q8IWU2 1503 aa9.24□□□□□ -0.93
NECAP1-226ENST00000640481 CFAP65Q6ZU64 1925 aaKnown RBP9.24□□□□□ -0.93
NECAP1-226ENST00000640481 ABCA6Q8N139 1617 aa9.24□□□□□ -0.93
NECAP1-226ENST00000640481 MADDQ8WXG6 1647 aa9.23□□□□□ -0.93
NECAP1-226ENST00000640481 NPATQ14207 1427 aa9.23□□□□□ -0.93
NECAP1-226ENST00000640481 RNF17Q9BXT8 1623 aaKnown RBP9.23□□□□□ -0.93
NECAP1-226ENST00000640481 CFAP70Q5T0N1 1121 aa9.23□□□□□ -0.93
NECAP1-226ENST00000640481 ADGRF5Q8IZF2 1346 aa9.23□□□□□ -0.93
NECAP1-226ENST00000640481 FKBP8Q14318 412 aa9.23□□□□□ -0.93
NECAP1-226ENST00000640481 MAP3K4Q9Y6R4 1608 aa9.22□□□□□ -0.93
NECAP1-226ENST00000640481 COL17A1Q9UMD9 1497 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-226ENST00000640481 PER1O15534 1290 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-226ENST00000640481 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
NECAP1-226ENST00000640481 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.93
NECAP1-226ENST00000640481 RALBP1Q15311 655 aa9.21□□□□□ -0.93
NECAP1-226ENST00000640481 PANK3Q9H999 370 aa9.21□□□□□ -0.93
NECAP1-226ENST00000640481 GLI2P10070 1586 aa9.2□□□□□ -0.94
NECAP1-226ENST00000640481 DIP2CQ9Y2E4 1556 aa9.2□□□□□ -0.94
NECAP1-226ENST00000640481 KIF1BO60333 1816 aa9.2□□□□□ -0.94
NECAP1-226ENST00000640481 PNISRQ8TF01 805 aaKnown RBP9.2□□□□□ -0.94
NECAP1-226ENST00000640481 BCANQ96GW7 911 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms