RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 CAMK2BQ13554 666 aa11.62□□□□□ -0.55
AP3S1-209ENST00000640413 IFFO2Q5TF58 517 aa11.6□□□□□ -0.55
AP3S1-209ENST00000640413 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
AP3S1-209ENST00000640413 C6orf132Q5T0Z8 1188 aa11.59□□□□□ -0.55
AP3S1-209ENST00000640413 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
AP3S1-209ENST00000640413 BCAMP50895 628 aa11.58□□□□□ -0.56
AP3S1-209ENST00000640413 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
AP3S1-209ENST00000640413 EPAS1Q99814 870 aa11.58□□□□□ -0.56
AP3S1-209ENST00000640413 DDX12PQ92771 950 aa11.57□□□□□ -0.56
AP3S1-209ENST00000640413 A0A0G2JS52 829 aa11.56□□□□□ -0.56
AP3S1-209ENST00000640413 SEPT9Q9UHD8 586 aaPredicted RBP11.55□□□□□ -0.56
AP3S1-209ENST00000640413 LAPTM4BQ86VI4 370 aa11.54□□□□□ -0.56
AP3S1-209ENST00000640413 BBXQ8WY36 941 aaPredicted RBP11.54□□□□□ -0.56
AP3S1-209ENST00000640413 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
AP3S1-209ENST00000640413 ZFRQ96KR1 1074 aaKnown RBP11.53□□□□□ -0.56
AP3S1-209ENST00000640413 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
AP3S1-209ENST00000640413 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
AP3S1-209ENST00000640413 RGS20O76081 388 aa11.51□□□□□ -0.57
AP3S1-209ENST00000640413 WBP1LQ9NX94 342 aa11.49□□□□□ -0.57
AP3S1-209ENST00000640413 NBR1Q14596 966 aa11.48□□□□□ -0.57
AP3S1-209ENST00000640413 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
AP3S1-209ENST00000640413 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
AP3S1-209ENST00000640413 MAP3K7O43318 606 aa11.45□□□□□ -0.58
AP3S1-209ENST00000640413 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
AP3S1-209ENST00000640413 PDIA6Q15084 440 aa11.45□□□□□ -0.58
AP3S1-209ENST00000640413 FAM98CQ17RN3 349 aaKnown RBP11.45□□□□□ -0.58
AP3S1-209ENST00000640413 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
AP3S1-209ENST00000640413 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
AP3S1-209ENST00000640413 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
AP3S1-209ENST00000640413 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.42□□□□□ -0.58
AP3S1-209ENST00000640413 HPS5Q9UPZ3 1129 aa11.42□□□□□ -0.58
AP3S1-209ENST00000640413 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
AP3S1-209ENST00000640413 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
AP3S1-209ENST00000640413 SPDYE16A6NNV3 312 aaPredicted RBP11.4□□□□□ -0.58
AP3S1-209ENST00000640413 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
AP3S1-209ENST00000640413 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.58
AP3S1-209ENST00000640413 PRIM1P49642 420 aaKnown RBP11.39□□□□□ -0.59
AP3S1-209ENST00000640413 KCNC4Q03721 635 aa11.39□□□□□ -0.59
AP3S1-209ENST00000640413 SMAPO00193 183 aa11.38□□□□□ -0.59
AP3S1-209ENST00000640413 E2F4Q16254 413 aa11.38□□□□□ -0.59
AP3S1-209ENST00000640413 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
AP3S1-209ENST00000640413 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
AP3S1-209ENST00000640413 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
AP3S1-209ENST00000640413 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
AP3S1-209ENST00000640413 FAM198AQ9UFP1 575 aa11.36□□□□□ -0.59
AP3S1-209ENST00000640413 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
AP3S1-209ENST00000640413 C3orf80F5H4A9 247 aa11.34□□□□□ -0.59
AP3S1-209ENST00000640413 PRSS12P56730 875 aa11.34□□□□□ -0.59
AP3S1-209ENST00000640413 PPP4CP60510 307 aa11.32□□□□□ -0.6
AP3S1-209ENST00000640413 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
AP3S1-209ENST00000640413 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
AP3S1-209ENST00000640413 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
AP3S1-209ENST00000640413 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
AP3S1-209ENST00000640413 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
AP3S1-209ENST00000640413 OSBPP22059 807 aa11.28□□□□□ -0.6
AP3S1-209ENST00000640413 CERKQ8TCT0 537 aa11.28□□□□□ -0.6
AP3S1-209ENST00000640413 TATDN2Q93075 761 aa11.28□□□□□ -0.6
AP3S1-209ENST00000640413 NBPF26B4DH59 902 aa11.25□□□□□ -0.61
AP3S1-209ENST00000640413 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
AP3S1-209ENST00000640413 TJAP1Q5JTD0 557 aa11.25□□□□□ -0.61
AP3S1-209ENST00000640413 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
AP3S1-209ENST00000640413 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
AP3S1-209ENST00000640413 Q6ZNB5 142 aa11.23□□□□□ -0.61
AP3S1-209ENST00000640413 RNF40O75150 1001 aa11.22□□□□□ -0.61
AP3S1-209ENST00000640413 MTRQ99707 1265 aa11.21□□□□□ -0.61
AP3S1-209ENST00000640413 ZNF516Q92618 1163 aa11.18□□□□□ -0.62
AP3S1-209ENST00000640413 IL21Q9HBE4 155 aa11.18□□□□□ -0.62
AP3S1-209ENST00000640413 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
AP3S1-209ENST00000640413 HDGFP51858 240 aaKnown RBP11.17□□□□□ -0.62
AP3S1-209ENST00000640413 PADI6Q6TGC4 694 aa11.17□□□□□ -0.62
AP3S1-209ENST00000640413 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
AP3S1-209ENST00000640413 APLP1P51693 650 aa11.16□□□□□ -0.62
AP3S1-209ENST00000640413 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
AP3S1-209ENST00000640413 SWT1Q5T5J6 900 aaKnown RBP11.15□□□□□ -0.62
AP3S1-209ENST00000640413 PPP1R18Q6NYC8 613 aa11.15□□□□□ -0.62
AP3S1-209ENST00000640413 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
AP3S1-209ENST00000640413 GFRA3O60609 400 aa11.12□□□□□ -0.63
AP3S1-209ENST00000640413 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
AP3S1-209ENST00000640413 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
AP3S1-209ENST00000640413 LCE2BO14633 110 aa11.09□□□□□ -0.63
AP3S1-209ENST00000640413 COPS2P61201 443 aa11.09□□□□□ -0.63
AP3S1-209ENST00000640413 LAPTM4AQ15012 233 aa11.09□□□□□ -0.63
AP3S1-209ENST00000640413 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
AP3S1-209ENST00000640413 SLF2Q8IX21 1173 aa11.08□□□□□ -0.64
AP3S1-209ENST00000640413 EYA1Q99502 592 aa11.08□□□□□ -0.64
AP3S1-209ENST00000640413 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
AP3S1-209ENST00000640413 TRAF7Q6Q0C0 670 aa11.04□□□□□ -0.64
AP3S1-209ENST00000640413 NECTIN2Q92692 538 aa11.04□□□□□ -0.64
AP3S1-209ENST00000640413 V9GY48 417 aaPredicted RBP11.04□□□□□ -0.64
AP3S1-209ENST00000640413 KCNV2Q8TDN2 545 aa11.03□□□□□ -0.64
AP3S1-209ENST00000640413 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
AP3S1-209ENST00000640413 NRG2O14511 850 aaPredicted RBP11.01□□□□□ -0.65
AP3S1-209ENST00000640413 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
AP3S1-209ENST00000640413 ZPR1O75312 459 aa11□□□□□ -0.65
AP3S1-209ENST00000640413 PTGDRQ13258 359 aa11□□□□□ -0.65
AP3S1-209ENST00000640413 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
AP3S1-209ENST00000640413 GGCXP38435 758 aa10.98□□□□□ -0.65
AP3S1-209ENST00000640413 FAM161AQ3B820 660 aa10.98□□□□□ -0.65
AP3S1-209ENST00000640413 BLOC1S3Q6QNY0 202 aa10.97□□□□□ -0.65
AP3S1-209ENST00000640413 DNAJB2P25686 324 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms