RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 FCHSD2O94868 740 aa12.66□□□□□ -0.38
RTTN-217ENST00000640393 ZMYND10O75800 440 aa12.65□□□□□ -0.38
RTTN-217ENST00000640393 LCE2DQ5TA82 110 aaPredicted RBP12.65□□□□□ -0.38
RTTN-217ENST00000640393 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.38
RTTN-217ENST00000640393 FECHP22830 423 aa12.64□□□□□ -0.39
RTTN-217ENST00000640393 PTGDRQ13258 359 aa12.64□□□□□ -0.39
RTTN-217ENST00000640393 NPDC1Q9NQX5 325 aaPredicted RBP12.63□□□□□ -0.39
RTTN-217ENST00000640393 GPR37O15354 613 aa12.62□□□□□ -0.39
RTTN-217ENST00000640393 PTPREP23469 700 aa12.62□□□□□ -0.39
RTTN-217ENST00000640393 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
RTTN-217ENST00000640393 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
RTTN-217ENST00000640393 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
RTTN-217ENST00000640393 HS3ST6Q96QI5 342 aa12.61□□□□□ -0.39
RTTN-217ENST00000640393 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
RTTN-217ENST00000640393 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
RTTN-217ENST00000640393 GNPATO15228 680 aa12.6□□□□□ -0.39
RTTN-217ENST00000640393 COL9A1P20849 921 aa12.6□□□□□ -0.39
RTTN-217ENST00000640393 PSEN2P49810 448 aa12.6□□□□□ -0.39
RTTN-217ENST00000640393 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
RTTN-217ENST00000640393 HIC1Q14526 733 aa12.59□□□□□ -0.39
RTTN-217ENST00000640393 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
RTTN-217ENST00000640393 FAM161AQ3B820 660 aa12.55□□□□□ -0.4
RTTN-217ENST00000640393 POTEEQ6S8J3 1075 aa12.55□□□□□ -0.4
RTTN-217ENST00000640393 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
RTTN-217ENST00000640393 ZNF687Q8N1G0 1237 aa12.54□□□□□ -0.4
RTTN-217ENST00000640393 CERKQ8TCT0 537 aa12.54□□□□□ -0.4
RTTN-217ENST00000640393 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
RTTN-217ENST00000640393 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
RTTN-217ENST00000640393 PRSS12P56730 875 aa12.52□□□□□ -0.41
RTTN-217ENST00000640393 PPP1R3GB7ZBB8 358 aa12.51□□□□□ -0.41
RTTN-217ENST00000640393 PROX2Q3B8N5 592 aa12.51□□□□□ -0.41
RTTN-217ENST00000640393 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
RTTN-217ENST00000640393 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
RTTN-217ENST00000640393 IRF6O14896 467 aa12.5□□□□□ -0.41
RTTN-217ENST00000640393 AK7Q96M32 723 aa12.5□□□□□ -0.41
RTTN-217ENST00000640393 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
RTTN-217ENST00000640393 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
RTTN-217ENST00000640393 TSKSQ9UJT2 592 aa12.47□□□□□ -0.41
RTTN-217ENST00000640393 FAM198AQ9UFP1 575 aa12.46□□□□□ -0.41
RTTN-217ENST00000640393 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
RTTN-217ENST00000640393 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
RTTN-217ENST00000640393 TRIM66O15016 1216 aa12.43□□□□□ -0.42
RTTN-217ENST00000640393 KIAA1468Q9P260 1216 aa12.43□□□□□ -0.42
RTTN-217ENST00000640393 SMAPO00193 183 aa12.43□□□□□ -0.42
RTTN-217ENST00000640393 PBX2P40425 430 aa12.43□□□□□ -0.42
RTTN-217ENST00000640393 ANKRD13DQ6ZTN6 518 aa12.43□□□□□ -0.42
RTTN-217ENST00000640393 PACS2Q86VP3 889 aa12.43□□□□□ -0.42
RTTN-217ENST00000640393 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
RTTN-217ENST00000640393 POTEGQ6S5H5 508 aa12.42□□□□□ -0.42
RTTN-217ENST00000640393 NUDT18Q6ZVK8 323 aa12.42□□□□□ -0.42
RTTN-217ENST00000640393 NLRP7Q8WX94 980 aa12.42□□□□□ -0.42
RTTN-217ENST00000640393 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
RTTN-217ENST00000640393 POTEMA6NI47 508 aa12.4□□□□□ -0.42
RTTN-217ENST00000640393 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
RTTN-217ENST00000640393 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
RTTN-217ENST00000640393 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
RTTN-217ENST00000640393 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
RTTN-217ENST00000640393 TATDN2Q93075 761 aa12.39□□□□□ -0.43
RTTN-217ENST00000640393 PHOX2BQ99453 314 aa12.38□□□□□ -0.43
RTTN-217ENST00000640393 OATP04181 439 aa12.37□□□□□ -0.43
RTTN-217ENST00000640393 PDE4DQ08499 809 aa12.37□□□□□ -0.43
RTTN-217ENST00000640393 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
RTTN-217ENST00000640393 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
RTTN-217ENST00000640393 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
RTTN-217ENST00000640393 SEPT9Q9UHD8 586 aaPredicted RBP12.36□□□□□ -0.43
RTTN-217ENST00000640393 NBPF26B4DH59 902 aa12.35□□□□□ -0.43
RTTN-217ENST00000640393 METTL3Q86U44 580 aaKnown RBP12.35□□□□□ -0.43
RTTN-217ENST00000640393 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
RTTN-217ENST00000640393 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
RTTN-217ENST00000640393 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
RTTN-217ENST00000640393 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
RTTN-217ENST00000640393 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
RTTN-217ENST00000640393 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
RTTN-217ENST00000640393 RABGEF1Q9UJ41 708 aa12.33□□□□□ -0.44
RTTN-217ENST00000640393 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
RTTN-217ENST00000640393 ADGRD1Q6QNK2 874 aa12.32□□□□□ -0.44
RTTN-217ENST00000640393 STAC3Q96MF2 364 aa12.32□□□□□ -0.44
RTTN-217ENST00000640393 EYA1Q99502 592 aa12.32□□□□□ -0.44
RTTN-217ENST00000640393 SLC4A5Q9BY07 1137 aa12.32□□□□□ -0.44
RTTN-217ENST00000640393 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
RTTN-217ENST00000640393 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
RTTN-217ENST00000640393 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
RTTN-217ENST00000640393 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
RTTN-217ENST00000640393 TK2O00142 265 aa12.28□□□□□ -0.44
RTTN-217ENST00000640393 AMHR2Q16671 573 aa12.28□□□□□ -0.44
RTTN-217ENST00000640393 PARP9Q8IXQ6 854 aa12.27□□□□□ -0.45
RTTN-217ENST00000640393 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
RTTN-217ENST00000640393 NBPF3Q9H094 633 aa12.26□□□□□ -0.45
RTTN-217ENST00000640393 KDM4CQ9H3R0 1056 aa12.26□□□□□ -0.45
RTTN-217ENST00000640393 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
RTTN-217ENST00000640393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
RTTN-217ENST00000640393 DNAJB2P25686 324 aa12.24□□□□□ -0.45
RTTN-217ENST00000640393 CLCN1P35523 988 aa12.24□□□□□ -0.45
RTTN-217ENST00000640393 GIGYF2Q6Y7W6 1299 aaKnown RBP12.24□□□□□ -0.45
RTTN-217ENST00000640393 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
RTTN-217ENST00000640393 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
RTTN-217ENST00000640393 GPCPD1Q9NPB8 672 aa12.23□□□□□ -0.45
RTTN-217ENST00000640393 HRO43593 1189 aa12.22□□□□□ -0.45
RTTN-217ENST00000640393 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
RTTN-217ENST00000640393 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms