RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 BHMG1C9JSJ3 638 aaPredicted RBP7.97□□□□□ -1.13
ATM-230ENST00000640388 SPDYE16A6NNV3 312 aaPredicted RBP7.96□□□□□ -1.14
ATM-230ENST00000640388 PDIA6Q15084 440 aa7.96□□□□□ -1.14
ATM-230ENST00000640388 KCTD12Q96CX2 325 aaKnown RBP7.96□□□□□ -1.14
ATM-230ENST00000640388 ZBED2Q9BTP6 218 aa7.96□□□□□ -1.14
ATM-230ENST00000640388 ZDHHC16Q969W1 377 aa7.95□□□□□ -1.14
ATM-230ENST00000640388 STAC3Q96MF2 364 aa7.95□□□□□ -1.14
ATM-230ENST00000640388 IFFO2Q5TF58 517 aa7.94□□□□□ -1.14
ATM-230ENST00000640388 ADAM33Q9BZ11 813 aa7.93□□□□□ -1.14
ATM-230ENST00000640388 DDX12PQ92771 950 aa7.92□□□□□ -1.14
ATM-230ENST00000640388 PPP1R3GB7ZBB8 358 aa7.91□□□□□ -1.14
ATM-230ENST00000640388 SEMA3EO15041 775 aa7.91□□□□□ -1.14
ATM-230ENST00000640388 THSD4Q6ZMP0 1018 aa7.91□□□□□ -1.14
ATM-230ENST00000640388 GRXCR2A6NFK2 248 aa7.9□□□□□ -1.14
ATM-230ENST00000640388 NBPF3Q9H094 633 aa7.9□□□□□ -1.14
ATM-230ENST00000640388 FBXW7Q969H0 707 aa7.89□□□□□ -1.15
ATM-230ENST00000640388 PCDHGA10Q9Y5H3 936 aa7.89□□□□□ -1.15
ATM-230ENST00000640388 PHF14O94880 888 aa7.88□□□□□ -1.15
ATM-230ENST00000640388 MLLT3P42568 568 aaPredicted RBP7.88□□□□□ -1.15
ATM-230ENST00000640388 TYW1BQ6NUM6 668 aa7.88□□□□□ -1.15
ATM-230ENST00000640388 NBR1Q14596 966 aa7.87□□□□□ -1.15
ATM-230ENST00000640388 MRPL50Q8N5N7 158 aaKnown RBP7.87□□□□□ -1.15
ATM-230ENST00000640388 RABGEF1Q9UJ41 708 aa7.87□□□□□ -1.15
ATM-230ENST00000640388 RGS20O76081 388 aa7.86□□□□□ -1.15
ATM-230ENST00000640388 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
ATM-230ENST00000640388 WNT2BQ93097 391 aa7.85□□□□□ -1.15
ATM-230ENST00000640388 RBM33Q96EV2 1170 aaKnown RBP7.85□□□□□ -1.15
ATM-230ENST00000640388 EPAS1Q99814 870 aa7.85□□□□□ -1.15
ATM-230ENST00000640388 TESPA1A2RU30 521 aaPredicted RBP7.84□□□□□ -1.15
ATM-230ENST00000640388 GOLGA8CPA6NN73 597 aa7.84□□□□□ -1.15
ATM-230ENST00000640388 PTPN5P54829 565 aa7.84□□□□□ -1.15
ATM-230ENST00000640388 OSBPP22059 807 aa7.83□□□□□ -1.16
ATM-230ENST00000640388 LAPTM4BQ86VI4 370 aa7.83□□□□□ -1.16
ATM-230ENST00000640388 COL9A1P20849 921 aa7.82□□□□□ -1.16
ATM-230ENST00000640388 SMYD5Q6GMV2 418 aa7.82□□□□□ -1.16
ATM-230ENST00000640388 MAP3K7O43318 606 aa7.81□□□□□ -1.16
ATM-230ENST00000640388 PRIM1P49642 420 aaKnown RBP7.81□□□□□ -1.16
ATM-230ENST00000640388 EN1Q05925 392 aaPredicted RBP7.81□□□□□ -1.16
ATM-230ENST00000640388 A0A0G2JS52 829 aa7.8□□□□□ -1.16
ATM-230ENST00000640388 PROX2Q3B8N5 592 aa7.8□□□□□ -1.16
ATM-230ENST00000640388 C6orf132Q5T0Z8 1188 aa7.79□□□□□ -1.16
ATM-230ENST00000640388 ANKK1Q8NFD2 765 aa7.79□□□□□ -1.16
ATM-230ENST00000640388 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
ATM-230ENST00000640388 ITGBL1O95965 494 aaPredicted RBP7.78□□□□□ -1.16
ATM-230ENST00000640388 TSR1Q2NL82 804 aaKnown RBP7.78□□□□□ -1.16
ATM-230ENST00000640388 NYAP1Q6ZVC0 841 aa7.78□□□□□ -1.16
ATM-230ENST00000640388 BCANQ96GW7 911 aa7.78□□□□□ -1.16
ATM-230ENST00000640388 SOWAHBA6NEL2 793 aa7.77□□□□□ -1.17
ATM-230ENST00000640388 RBM26Q5T8P6 1007 aaKnown RBP7.77□□□□□ -1.17
ATM-230ENST00000640388 NUTM2FA1L443 756 aa7.76□□□□□ -1.17
ATM-230ENST00000640388 TRIM6-TRIM34B2RNG4 842 aa7.76□□□□□ -1.17
ATM-230ENST00000640388 ZFRQ96KR1 1074 aaKnown RBP7.75□□□□□ -1.17
ATM-230ENST00000640388 CDHR5Q9HBB8 845 aa7.75□□□□□ -1.17
ATM-230ENST00000640388 KIAA1468Q9P260 1216 aa7.75□□□□□ -1.17
ATM-230ENST00000640388 FAM98CQ17RN3 349 aaKnown RBP7.73□□□□□ -1.17
ATM-230ENST00000640388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.73□□□□□ -1.17
ATM-230ENST00000640388 BCAMP50895 628 aa7.72□□□□□ -1.17
ATM-230ENST00000640388 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.18
ATM-230ENST00000640388 NPDC1Q9NQX5 325 aaPredicted RBP7.71□□□□□ -1.18
ATM-230ENST00000640388 GPIHBP1Q8IV16 184 aa7.7□□□□□ -1.18
ATM-230ENST00000640388 CERKQ8TCT0 537 aa7.7□□□□□ -1.18
ATM-230ENST00000640388 PTGDRQ13258 359 aa7.69□□□□□ -1.18
ATM-230ENST00000640388 SEPT9Q9UHD8 586 aaPredicted RBP7.69□□□□□ -1.18
ATM-230ENST00000640388 FCHSD2O94868 740 aa7.68□□□□□ -1.18
ATM-230ENST00000640388 CDCA7LQ96GN5 454 aa7.68□□□□□ -1.18
ATM-230ENST00000640388 WBP1LQ9NX94 342 aa7.68□□□□□ -1.18
ATM-230ENST00000640388 PRSS12P56730 875 aa7.67□□□□□ -1.18
ATM-230ENST00000640388 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.67□□□□□ -1.18
ATM-230ENST00000640388 TSR3Q9UJK0 312 aaKnown RBP7.67□□□□□ -1.18
ATM-230ENST00000640388 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
ATM-230ENST00000640388 PACS2Q86VP3 889 aa7.66□□□□□ -1.18
ATM-230ENST00000640388 LRCH3Q96II8 777 aa7.66□□□□□ -1.18
ATM-230ENST00000640388 IRX2Q9BZI1 471 aaPredicted RBP7.66□□□□□ -1.18
ATM-230ENST00000640388 PADI6Q6TGC4 694 aa7.65□□□□□ -1.18
ATM-230ENST00000640388 GPR37O15354 613 aa7.64□□□□□ -1.19
ATM-230ENST00000640388 KCNC4Q03721 635 aa7.64□□□□□ -1.19
ATM-230ENST00000640388 HIC1Q14526 733 aa7.64□□□□□ -1.19
ATM-230ENST00000640388 RBM27Q9P2N5 1060 aaKnown RBP7.64□□□□□ -1.19
ATM-230ENST00000640388 HPS5Q9UPZ3 1129 aa7.64□□□□□ -1.19
ATM-230ENST00000640388 GNPATO15228 680 aa7.63□□□□□ -1.19
ATM-230ENST00000640388 FAM198AQ9UFP1 575 aa7.63□□□□□ -1.19
ATM-230ENST00000640388 FECHP22830 423 aa7.62□□□□□ -1.19
ATM-230ENST00000640388 TTC13Q8NBP0 860 aa7.61□□□□□ -1.19
ATM-230ENST00000640388 ZC3H15Q8WU90 426 aaKnown RBP7.61□□□□□ -1.19
ATM-230ENST00000640388 NBPF26B4DH59 902 aa7.6□□□□□ -1.19
ATM-230ENST00000640388 C3orf80F5H4A9 247 aa7.6□□□□□ -1.19
ATM-230ENST00000640388 SMAPO00193 183 aa7.6□□□□□ -1.19
ATM-230ENST00000640388 NUDT18Q6ZVK8 323 aa7.6□□□□□ -1.19
ATM-230ENST00000640388 TATDN2Q93075 761 aa7.6□□□□□ -1.19
ATM-230ENST00000640388 PNMA3Q9UL41 463 aa7.6□□□□□ -1.19
ATM-230ENST00000640388 FAM161AQ3B820 660 aa7.59□□□□□ -1.19
ATM-230ENST00000640388 ZMYND10O75800 440 aa7.57□□□□□ -1.2
ATM-230ENST00000640388 PPP4CP60510 307 aa7.57□□□□□ -1.2
ATM-230ENST00000640388 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
ATM-230ENST00000640388 ADGRG1Q9Y653 693 aa7.57□□□□□ -1.2
ATM-230ENST00000640388 TJAP1Q5JTD0 557 aa7.56□□□□□ -1.2
ATM-230ENST00000640388 KRI1Q8N9T8 703 aaKnown RBP7.56□□□□□ -1.2
ATM-230ENST00000640388 MAP2K5Q13163 448 aa7.55□□□□□ -1.2
ATM-230ENST00000640388 BARGINQ6ZT62 677 aa7.55□□□□□ -1.2
ATM-230ENST00000640388 RBM46Q8TBY0 533 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms