RNA–Protein interactions for RNA: ENST00000640361.1

PRICKLE1-217, Transcript of prickle planar cell polarity protein 1, human

TSL 4

Gene PRICKLE1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRICKLE1-217	ENST00000640361	POLR1A	O95602	1720 aa	Predicted RBP	10.43	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	GLI2	P10070	1586 aa		10.42	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	ATP7A	Q04656	1500 aa		10.42	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	BCORL1	Q5H9F3	1711 aa		10.41	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	KCNH8	Q96L42	1107 aa		10.41	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	NEO1	Q92859	1461 aa		10.41	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	UHRF1BP1	Q6BDS2	1440 aa		10.41	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	KDM5C	P41229	1560 aa		10.4	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	ADGRL1	O94910	1474 aa		10.4	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	ZNF518A	Q6AHZ1	1483 aa		10.4	□□□□□ -0.74
PRICKLE1-217	ENST00000640361	TRAPPC8	Q9Y2L5	1435 aa		10.4	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	NEURL4	Q96JN8	1562 aa		10.39	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	PKD2	Q13563	968 aa		10.39	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	DMRT2	Q9Y5R5	561 aa		10.39	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	VWDE	Q8N2E2	1590 aa		10.39	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	SPAG9	O60271	1321 aa	Known RBP	10.38	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	TET3	O43151	1660 aa		10.38	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	MLH3	Q9UHC1	1453 aa		10.37	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	MAP3K4	Q9Y6R4	1608 aa		10.37	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	L3MBTL2	Q969R5	705 aa		10.37	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	RTN4	Q9NQC3	1192 aa	Known RBP	10.37	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	KIDINS220	Q9ULH0	1771 aa		10.37	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	CD109	Q6YHK3	1445 aa		10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	SCAPER	Q9BY12	1400 aa		10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	STAC3	Q96MF2	364 aa		10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	PRDM15	P57071	1507 aa	Predicted RBP	10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	RIMBP3C	A6NJZ7	1639 aa		10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	RIMBP3B	A6NNM3	1639 aa		10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	RNF17	Q9BXT8	1623 aa	Known RBP	10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	RIMBP3	Q9UFD9	1639 aa		10.36	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	LAMC1	P11047	1609 aa		10.35	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	DHX29	Q7Z478	1369 aa	Known RBP	10.35	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	HECW2	Q9P2P5	1572 aa		10.35	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	CENPB	P07199	599 aa	Predicted RBP	10.34	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	RALGAPB	Q86X10	1494 aa		10.34	□□□□□ -0.75
PRICKLE1-217	ENST00000640361	CCDC144A	A2RUR9	1427 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	POGZ	Q7Z3K3	1410 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	LMTK2	Q8IWU2	1503 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	SPHKAP	Q2M3C7	1700 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	KANK1	Q14678	1352 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361		E9PCH4	1651 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	CEP152	O94986	1710 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	TRPM2	O94759	1503 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	SPATA31E1	Q6ZUB1	1445 aa		10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.33	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	MIER1	Q8N108	512 aa		10.32	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	PTPRT	O14522	1441 aa		10.32	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	RICTOR	Q6R327	1708 aa		10.31	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.31	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	MROH1	Q8NDA8	1641 aa		10.31	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	PLA2R1	Q13018	1463 aa		10.3	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	TRPM1	Q7Z4N2	1603 aa		10.29	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	ZMYM4	Q5VZL5	1548 aa		10.29	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	SLC24A1	O60721	1099 aa		10.29	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	ATXN8OS	P0DMR3	200 aa		10.29	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	AFAP1	Q8N556	730 aa		10.29	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	A2M	P01023	1474 aa		10.29	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	ZC3H13	Q5T200	1668 aa	Known RBP	10.28	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	DIP2B	Q9P265	1576 aa		10.28	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	EFCAB6	Q5THR3	1501 aa		10.28	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	KIAA1210	Q9ULL0	1709 aa		10.27	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	RERE	Q9P2R6	1566 aa		10.27	□□□□□ -0.76
PRICKLE1-217	ENST00000640361	CCER2	I3L3R5	266 aa		10.27	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	NBPF8	Q3BBV2	869 aa		10.27	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	GPRASP1	Q5JY77	1395 aa		10.26	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	HSPA5	P11021	654 aa	Known RBP	10.26	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	KIF1B	O60333	1816 aa		10.26	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	ABCA6	Q8N139	1617 aa		10.25	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	PRAG1	Q86YV5	1406 aa		10.25	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	ROCK2	O75116	1388 aa	Known RBP	10.25	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	FRMPD1	Q5SYB0	1578 aa		10.24	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	DIP2C	Q9Y2E4	1556 aa		10.24	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	MYCN	P04198	464 aa	Predicted RBP	10.24	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	DDX10	Q13206	875 aa	Known RBP	10.23	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	USP47	Q96K76	1375 aa		10.23	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	CCDC7	Q96M83	1385 aa		10.23	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	CNTLN	Q9NXG0	1405 aa		10.23	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	CLTCL1	P53675	1640 aa		10.22	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	PPRC1	Q5VV67	1664 aa	Known RBP	10.22	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	IFT172	Q9UG01	1749 aa		10.22	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	ANP32C	O43423	234 aa		10.22	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	KIF3B	O15066	747 aa		10.21	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
PRICKLE1-217	ENST00000640361	WASHC2A	Q641Q2	1341 aa		10.21	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	ARHGAP31	Q2M1Z3	1444 aa		10.21	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	MYOM2	P54296	1465 aa		10.21	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	MADD	Q8WXG6	1647 aa		10.21	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	AGL	P35573	1532 aa		10.2	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	FKBP8	Q14318	412 aa		10.2	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	CAMSAP1	Q5T5Y3	1602 aa		10.2	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	KIF13A	Q9H1H9	1805 aa		10.19	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	ABCC3	O15438	1527 aa		10.19	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	CYB5RL	Q6IPT4	315 aa		10.19	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	DCAF11	Q8TEB1	546 aa		10.19	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	IQGAP1	P46940	1657 aa		10.18	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	PIK3C2B	O00750	1634 aa		10.18	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	KTN1	Q86UP2	1357 aa	Known RBP	10.17	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	CARD11	Q9BXL7	1154 aa		10.17	□□□□□ -0.78
PRICKLE1-217	ENST00000640361	ADGRB3	O60242	1522 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms