RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 HMMRO75330 724 aa13.97□□□□□ -0.17
SCN1B-208ENST00000640135 EVA1CP58658 441 aa13.97□□□□□ -0.17
SCN1B-208ENST00000640135 ST20-MTHFSA0A0A6YYL1 179 aa13.97□□□□□ -0.17
SCN1B-208ENST00000640135 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
SCN1B-208ENST00000640135 RWDD1Q9H446 243 aaPredicted RBP13.96□□□□□ -0.17
SCN1B-208ENST00000640135 ATF3P18847 181 aa13.96□□□□□ -0.18
SCN1B-208ENST00000640135 ANKRD50Q9ULJ7 1429 aa13.95□□□□□ -0.18
SCN1B-208ENST00000640135 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
SCN1B-208ENST00000640135 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
SCN1B-208ENST00000640135 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
SCN1B-208ENST00000640135 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
SCN1B-208ENST00000640135 PSME1Q06323 249 aa13.94□□□□□ -0.18
SCN1B-208ENST00000640135 KIAA1211Q6ZU35 1233 aa13.94□□□□□ -0.18
SCN1B-208ENST00000640135 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
SCN1B-208ENST00000640135 ARHGAP5Q13017 1502 aa13.94□□□□□ -0.18
SCN1B-208ENST00000640135 GPATCH3Q96I76 525 aa13.94□□□□□ -0.18
SCN1B-208ENST00000640135 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
SCN1B-208ENST00000640135 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
SCN1B-208ENST00000640135 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
SCN1B-208ENST00000640135 RCAN3Q9UKA8 241 aa13.93□□□□□ -0.18
SCN1B-208ENST00000640135 POGZQ7Z3K3 1410 aa13.92□□□□□ -0.18
SCN1B-208ENST00000640135 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
SCN1B-208ENST00000640135 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
SCN1B-208ENST00000640135 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
SCN1B-208ENST00000640135 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
SCN1B-208ENST00000640135 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
SCN1B-208ENST00000640135 CENPJQ9HC77 1338 aaPredicted RBP13.91□□□□□ -0.18
SCN1B-208ENST00000640135 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
SCN1B-208ENST00000640135 PANK3Q9H999 370 aa13.91□□□□□ -0.18
SCN1B-208ENST00000640135 SMC4Q9NTJ3 1288 aa13.91□□□□□ -0.18
SCN1B-208ENST00000640135 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
SCN1B-208ENST00000640135 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
SCN1B-208ENST00000640135 KIF21BO75037 1637 aa13.91□□□□□ -0.18
SCN1B-208ENST00000640135 ITPRIPQ8IWB1 547 aa13.9□□□□□ -0.18
SCN1B-208ENST00000640135 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
SCN1B-208ENST00000640135 NAP1L2Q9ULW6 460 aaPredicted RBP13.9□□□□□ -0.18
SCN1B-208ENST00000640135 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
SCN1B-208ENST00000640135 TEFQ10587 303 aa13.9□□□□□ -0.18
SCN1B-208ENST00000640135 AFAP1Q8N556 730 aa13.9□□□□□ -0.18
SCN1B-208ENST00000640135 NCOA2Q15596 1464 aa13.9□□□□□ -0.18
SCN1B-208ENST00000640135 USP47Q96K76 1375 aa13.89□□□□□ -0.19
SCN1B-208ENST00000640135 MIA2Q96PC5 1412 aa13.89□□□□□ -0.19
SCN1B-208ENST00000640135 SLC52A1Q9NWF4 448 aa13.89□□□□□ -0.19
SCN1B-208ENST00000640135 G3V3G9 751 aa13.88□□□□□ -0.19
SCN1B-208ENST00000640135 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
SCN1B-208ENST00000640135 ZNF644Q9H582 1327 aaPredicted RBP13.88□□□□□ -0.19
SCN1B-208ENST00000640135 KIAA0586Q9BVV6 1533 aa13.88□□□□□ -0.19
SCN1B-208ENST00000640135 TROQ12816 1431 aaPredicted RBP13.88□□□□□ -0.19
SCN1B-208ENST00000640135 HSCBQ8IWL3 235 aa13.88□□□□□ -0.19
SCN1B-208ENST00000640135 RRBP1Q9P2E9 1410 aaKnown RBP13.87□□□□□ -0.19
SCN1B-208ENST00000640135 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
SCN1B-208ENST00000640135 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
SCN1B-208ENST00000640135 GOLGA6L4A6NEF3 574 aa13.87□□□□□ -0.19
SCN1B-208ENST00000640135 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
SCN1B-208ENST00000640135 TRIM44Q96DX7 344 aaPredicted RBP13.87□□□□□ -0.19
SCN1B-208ENST00000640135 HFM1A2PYH4 1435 aa13.86□□□□□ -0.19
SCN1B-208ENST00000640135 NBR1Q14596 966 aa13.86□□□□□ -0.19
SCN1B-208ENST00000640135 CHMP3Q9Y3E7 222 aa13.86□□□□□ -0.19
SCN1B-208ENST00000640135 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
SCN1B-208ENST00000640135 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
SCN1B-208ENST00000640135 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
SCN1B-208ENST00000640135 NRDCO43847 1150 aa13.84□□□□□ -0.19
SCN1B-208ENST00000640135 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
SCN1B-208ENST00000640135 GOLGA6L6A8MZA4 724 aa13.84□□□□□ -0.19
SCN1B-208ENST00000640135 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
SCN1B-208ENST00000640135 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
SCN1B-208ENST00000640135 SLC4A10Q6U841 1118 aa13.82□□□□□ -0.2
SCN1B-208ENST00000640135 RAPGEF4Q8WZA2 1011 aa13.82□□□□□ -0.2
SCN1B-208ENST00000640135 EHBP1L1Q8N3D4 1523 aa13.81□□□□□ -0.2
SCN1B-208ENST00000640135 E9PSI1 815 aa13.81□□□□□ -0.2
SCN1B-208ENST00000640135 APBB1O00213 710 aa13.81□□□□□ -0.2
SCN1B-208ENST00000640135 PTMAP06454 111 aaKnown RBP13.81□□□□□ -0.2
SCN1B-208ENST00000640135 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
SCN1B-208ENST00000640135 PROSER2Q86WR7 435 aaPredicted RBP13.8□□□□□ -0.2
SCN1B-208ENST00000640135 GNL2Q13823 731 aaKnown RBP13.8□□□□□ -0.2
SCN1B-208ENST00000640135 CCDC146Q8IYE0 955 aa13.8□□□□□ -0.2
SCN1B-208ENST00000640135 SCAPERQ9BY12 1400 aa13.8□□□□□ -0.2
SCN1B-208ENST00000640135 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
SCN1B-208ENST00000640135 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
SCN1B-208ENST00000640135 FRAT2O75474 233 aaPredicted RBP13.79□□□□□ -0.2
SCN1B-208ENST00000640135 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
SCN1B-208ENST00000640135 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
SCN1B-208ENST00000640135 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
SCN1B-208ENST00000640135 C9orf84Q5VXU9 1444 aa13.78□□□□□ -0.2
SCN1B-208ENST00000640135 HECW1Q76N89 1606 aa13.78□□□□□ -0.2
SCN1B-208ENST00000640135 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
SCN1B-208ENST00000640135 CCDC34Q96HJ3 373 aa13.76□□□□□ -0.21
SCN1B-208ENST00000640135 GRIN2AQ12879 1464 aa13.76□□□□□ -0.21
SCN1B-208ENST00000640135 PRKRIP1Q9H875 184 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-208ENST00000640135 TCERG1O14776 1098 aaKnown RBP13.76□□□□□ -0.21
SCN1B-208ENST00000640135 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
SCN1B-208ENST00000640135 PTMSP20962 102 aa13.75□□□□□ -0.21
SCN1B-208ENST00000640135 NLRP6P59044 892 aa13.75□□□□□ -0.21
SCN1B-208ENST00000640135 CUL7Q14999 1698 aa13.75□□□□□ -0.21
SCN1B-208ENST00000640135 WASHC2AQ641Q2 1341 aa13.75□□□□□ -0.21
SCN1B-208ENST00000640135 HMGB2P26583 209 aaKnown RBP13.74□□□□□ -0.21
SCN1B-208ENST00000640135 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
SCN1B-208ENST00000640135 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
SCN1B-208ENST00000640135 TULP1O00294 542 aaPredicted RBP13.74□□□□□ -0.21
SCN1B-208ENST00000640135 ZKSCAN2Q63HK3 967 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms