RNA–Protein interactions for RNA: ENST00000639935.1

GABRD-211, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 2

Gene GABRD, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-211ENST00000639935 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
GABRD-211ENST00000639935 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
GABRD-211ENST00000639935 NCKAP5LQ9HCH0 1330 aa22.82■■□□□ 1.24
GABRD-211ENST00000639935 PTPRKQ15262 1439 aa22.82■■□□□ 1.24
GABRD-211ENST00000639935 CEP170BQ9Y4F5 1589 aaPredicted RBP22.81■■□□□ 1.24
GABRD-211ENST00000639935 A2MP01023 1474 aa22.8■■□□□ 1.24
GABRD-211ENST00000639935 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
GABRD-211ENST00000639935 TSPY4P0CV99 314 aa22.79■■□□□ 1.24
GABRD-211ENST00000639935 TSPY10P0CW01 314 aa22.79■■□□□ 1.24
GABRD-211ENST00000639935 RTEL1-TNFRSF6BF6WH68 1400 aa22.79■■□□□ 1.24
GABRD-211ENST00000639935 DNMT1P26358 1616 aaKnown RBP22.79■■□□□ 1.24
GABRD-211ENST00000639935 CROCC2H7BZ55 1655 aa22.76■■□□□ 1.23
GABRD-211ENST00000639935 MAST1Q9Y2H9 1570 aa22.76■■□□□ 1.23
GABRD-211ENST00000639935 ABCC5O15440 1437 aa22.75■■□□□ 1.23
GABRD-211ENST00000639935 DAPK1P53355 1430 aa22.75■■□□□ 1.23
GABRD-211ENST00000639935 PKD2Q13563 968 aa22.75■■□□□ 1.23
GABRD-211ENST00000639935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.75■■□□□ 1.23
GABRD-211ENST00000639935 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
GABRD-211ENST00000639935 SHANK2Q9UPX8 1470 aa22.74■■□□□ 1.23
GABRD-211ENST00000639935 UBAP1LF5GYI3 381 aa22.73■■□□□ 1.23
GABRD-211ENST00000639935 ADGBQ8N7X0 1667 aa22.71■■□□□ 1.23
GABRD-211ENST00000639935 A2ML1A8K2U0 1454 aa22.69■■□□□ 1.22
GABRD-211ENST00000639935 GGT6Q6P531 493 aa22.69■■□□□ 1.22
GABRD-211ENST00000639935 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
GABRD-211ENST00000639935 NEURL4Q96JN8 1562 aa22.65■■□□□ 1.22
GABRD-211ENST00000639935 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
GABRD-211ENST00000639935 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
GABRD-211ENST00000639935 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
GABRD-211ENST00000639935 ADGRL2O95490 1459 aa22.61■■□□□ 1.21
GABRD-211ENST00000639935 POLR1AO95602 1720 aaPredicted RBP22.61■■□□□ 1.21
GABRD-211ENST00000639935 ITGAEP38570 1179 aa22.6■■□□□ 1.21
GABRD-211ENST00000639935 CPS1P31327 1500 aa22.59■■□□□ 1.21
GABRD-211ENST00000639935 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
GABRD-211ENST00000639935 MED1Q15648 1581 aaPredicted RBP22.59■■□□□ 1.21
GABRD-211ENST00000639935 DUOX2Q9NRD8 1548 aa22.58■■□□□ 1.21
GABRD-211ENST00000639935 RRP7BPQ9NSQ0 103 aa22.58■■□□□ 1.21
GABRD-211ENST00000639935 PZPP20742 1482 aa22.57■■□□□ 1.2
GABRD-211ENST00000639935 FAM135AQ9P2D6 1515 aa22.57■■□□□ 1.2
GABRD-211ENST00000639935 ROCK1Q13464 1354 aa22.56■■□□□ 1.2
GABRD-211ENST00000639935 TNRQ92752 1358 aa22.56■■□□□ 1.2
GABRD-211ENST00000639935 HSPA1LP34931 641 aa22.56■■□□□ 1.2
GABRD-211ENST00000639935 KDM5DQ9BY66 1539 aa22.56■■□□□ 1.2
GABRD-211ENST00000639935 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
GABRD-211ENST00000639935 FBXO31Q5XUX0 539 aaPredicted RBP22.54■■□□□ 1.2
GABRD-211ENST00000639935 ALKQ9UM73 1620 aa22.53■■□□□ 1.2
GABRD-211ENST00000639935 EIF2AK4Q9P2K8 1649 aaKnown RBP22.53■■□□□ 1.2
GABRD-211ENST00000639935 ERBINQ96RT1 1412 aa22.52■■□□□ 1.2
GABRD-211ENST00000639935 KIF3BO15066 747 aa22.51■■□□□ 1.19
GABRD-211ENST00000639935 MED14O60244 1454 aa22.48■■□□□ 1.19
GABRD-211ENST00000639935 TOM1O60784 492 aa22.48■■□□□ 1.19
GABRD-211ENST00000639935 PIP4K2BP78356 416 aa22.48■■□□□ 1.19
GABRD-211ENST00000639935 DEPDC5O75140 1603 aa22.48■■□□□ 1.19
GABRD-211ENST00000639935 NLRP1Q9C000 1473 aa22.47■■□□□ 1.19
GABRD-211ENST00000639935 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
GABRD-211ENST00000639935 ANKRD50Q9ULJ7 1429 aa22.46■■□□□ 1.19
GABRD-211ENST00000639935 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
GABRD-211ENST00000639935 RNF17Q9BXT8 1623 aaKnown RBP22.46■■□□□ 1.19
GABRD-211ENST00000639935 NPHP4O75161 1426 aaPredicted RBP22.44■■□□□ 1.18
GABRD-211ENST00000639935 ANKLE2Q86XL3 938 aa22.44■■□□□ 1.18
GABRD-211ENST00000639935 WASHC2CQ9Y4E1 1318 aa22.43■■□□□ 1.18
GABRD-211ENST00000639935 THEMISQ8N1K5 641 aaPredicted RBP22.41■■□□□ 1.18
GABRD-211ENST00000639935 IQGAP1P46940 1657 aa22.41■■□□□ 1.18
GABRD-211ENST00000639935 STRCP1A6NGW2 1772 aa22.4■■□□□ 1.18
GABRD-211ENST00000639935 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.18
GABRD-211ENST00000639935 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
GABRD-211ENST00000639935 MROH1Q8NDA8 1641 aa22.39■■□□□ 1.17
GABRD-211ENST00000639935 NAIPQ13075 1403 aa22.38■■□□□ 1.17
GABRD-211ENST00000639935 ABCC3O15438 1527 aa22.37■■□□□ 1.17
GABRD-211ENST00000639935 PRDM15P57071 1507 aaPredicted RBP22.37■■□□□ 1.17
GABRD-211ENST00000639935 LRRC7Q96NW7 1537 aa22.36■■□□□ 1.17
GABRD-211ENST00000639935 SYNMO15061 1565 aa22.36■■□□□ 1.17
GABRD-211ENST00000639935 ZC3H13Q5T200 1668 aaKnown RBP22.36■■□□□ 1.17
GABRD-211ENST00000639935 KANK1Q14678 1352 aa22.35■■□□□ 1.17
GABRD-211ENST00000639935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.33■■□□□ 1.17
GABRD-211ENST00000639935 ERVK-7P63135 1459 aa22.33■■□□□ 1.16
GABRD-211ENST00000639935 UNC13BO14795 1591 aa22.32■■□□□ 1.16
GABRD-211ENST00000639935 CEP152O94986 1710 aa22.3■■□□□ 1.16
GABRD-211ENST00000639935 UBR1Q8IWV7 1749 aa22.28■■□□□ 1.16
GABRD-211ENST00000639935 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
GABRD-211ENST00000639935 LMTK2Q8IWU2 1503 aa22.26■■□□□ 1.15
GABRD-211ENST00000639935 SETD5Q9C0A6 1442 aa22.24■■□□□ 1.15
GABRD-211ENST00000639935 SCAF11Q99590 1463 aaKnown RBP22.24■■□□□ 1.15
GABRD-211ENST00000639935 ARHGAP23Q9P227 1491 aa22.24■■□□□ 1.15
GABRD-211ENST00000639935 TRIM26Q12899 539 aaPredicted RBP22.23■■□□□ 1.15
GABRD-211ENST00000639935 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
GABRD-211ENST00000639935 NUP155O75694 1391 aa22.23■■□□□ 1.15
GABRD-211ENST00000639935 SLIT1O75093 1534 aa22.22■■□□□ 1.15
GABRD-211ENST00000639935 ARHGAP31Q2M1Z3 1444 aa22.21■■□□□ 1.15
GABRD-211ENST00000639935 TET3O43151 1660 aa22.2■■□□□ 1.15
GABRD-211ENST00000639935 XIRP1Q702N8 1843 aaKnown RBP22.2■■□□□ 1.14
GABRD-211ENST00000639935 SENP3Q9H4L4 574 aaPredicted RBP22.2■■□□□ 1.14
GABRD-211ENST00000639935 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
GABRD-211ENST00000639935 LTKP29376 864 aa22.19■■□□□ 1.14
GABRD-211ENST00000639935 RGS17Q9UGC6 210 aaPredicted RBP22.19■■□□□ 1.14
GABRD-211ENST00000639935 EFCAB6Q5THR3 1501 aa22.19■■□□□ 1.14
GABRD-211ENST00000639935 TRIM52Q96A61 297 aa22.17■■□□□ 1.14
GABRD-211ENST00000639935 RAB3GAP2Q9H2M9 1393 aa22.16■■□□□ 1.14
GABRD-211ENST00000639935 RPRD2Q5VT52 1461 aaKnown RBP22.15■■□□□ 1.14
GABRD-211ENST00000639935 CFAP65Q6ZU64 1925 aaKnown RBP22.13■■□□□ 1.13
GABRD-211ENST00000639935 TXNDC2Q86VQ3 553 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms