RNA–Protein interactions for RNA: ENST00000639730.1

KCNMA1-270, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-270ENST00000639730 SAMD9LQ8IVG5 1584 aa11.08□□□□□ -0.64
KCNMA1-270ENST00000639730 CAMSAP2Q08AD1 1489 aa11.08□□□□□ -0.64
KCNMA1-270ENST00000639730 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
KCNMA1-270ENST00000639730 KDM5DQ9BY66 1539 aa11.07□□□□□ -0.64
KCNMA1-270ENST00000639730 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
KCNMA1-270ENST00000639730 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
KCNMA1-270ENST00000639730 MSH5O43196 834 aa11.05□□□□□ -0.64
KCNMA1-270ENST00000639730 CDK13Q14004 1512 aaKnown RBP11.05□□□□□ -0.64
KCNMA1-270ENST00000639730 NCOA2Q15596 1464 aa11.05□□□□□ -0.64
KCNMA1-270ENST00000639730 MED14O60244 1454 aa11.03□□□□□ -0.64
KCNMA1-270ENST00000639730 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
KCNMA1-270ENST00000639730 SCAPERQ9BY12 1400 aa11.03□□□□□ -0.64
KCNMA1-270ENST00000639730 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.64
KCNMA1-270ENST00000639730 CEP170BQ9Y4F5 1589 aaPredicted RBP11.02□□□□□ -0.64
KCNMA1-270ENST00000639730 MIA2Q96PC5 1412 aa11.02□□□□□ -0.65
KCNMA1-270ENST00000639730 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
KCNMA1-270ENST00000639730 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
KCNMA1-270ENST00000639730 ATP7AQ04656 1500 aa11.01□□□□□ -0.65
KCNMA1-270ENST00000639730 ARHGAP5Q13017 1502 aa11.01□□□□□ -0.65
KCNMA1-270ENST00000639730 A2ML1A8K2U0 1454 aa11.01□□□□□ -0.65
KCNMA1-270ENST00000639730 PKD2Q13563 968 aa10.98□□□□□ -0.65
KCNMA1-270ENST00000639730 NLRP1Q9C000 1473 aa10.98□□□□□ -0.65
KCNMA1-270ENST00000639730 CLTCQ00610 1675 aaKnown RBP10.97□□□□□ -0.65
KCNMA1-270ENST00000639730 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.66
KCNMA1-270ENST00000639730 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.66
KCNMA1-270ENST00000639730 DNMT1P26358 1616 aaKnown RBP10.95□□□□□ -0.66
KCNMA1-270ENST00000639730 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
KCNMA1-270ENST00000639730 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
KCNMA1-270ENST00000639730 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
KCNMA1-270ENST00000639730 ERICH6Q7L0X2 663 aa10.94□□□□□ -0.66
KCNMA1-270ENST00000639730 PZPP20742 1482 aa10.94□□□□□ -0.66
KCNMA1-270ENST00000639730 NEFLP07196 543 aa10.94□□□□□ -0.66
KCNMA1-270ENST00000639730 NEURL4Q96JN8 1562 aa10.94□□□□□ -0.66
KCNMA1-270ENST00000639730 RSPH4AQ5TD94 716 aa10.92□□□□□ -0.66
KCNMA1-270ENST00000639730 TRIM52Q96A61 297 aa10.92□□□□□ -0.66
KCNMA1-270ENST00000639730 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
KCNMA1-270ENST00000639730 VWDEQ8N2E2 1590 aa10.92□□□□□ -0.66
KCNMA1-270ENST00000639730 A2MP01023 1474 aa10.92□□□□□ -0.66
KCNMA1-270ENST00000639730 GPATCH8Q9UKJ3 1502 aaKnown RBP10.9□□□□□ -0.66
KCNMA1-270ENST00000639730 CROCC2H7BZ55 1655 aa10.9□□□□□ -0.66
KCNMA1-270ENST00000639730 SOCS7O14512 581 aa10.9□□□□□ -0.66
KCNMA1-270ENST00000639730 LMTK2Q8IWU2 1503 aa10.9□□□□□ -0.67
KCNMA1-270ENST00000639730 CFDP1Q9UEE9 299 aaPredicted RBP10.89□□□□□ -0.67
KCNMA1-270ENST00000639730 NWD1Q149M9 1564 aa10.89□□□□□ -0.67
KCNMA1-270ENST00000639730 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
KCNMA1-270ENST00000639730 SHANK2Q9UPX8 1470 aa10.89□□□□□ -0.67
KCNMA1-270ENST00000639730 SETD5Q9C0A6 1442 aa10.89□□□□□ -0.67
KCNMA1-270ENST00000639730 DEKP35659 375 aaKnown RBP10.89□□□□□ -0.67
KCNMA1-270ENST00000639730 ARHGAP31Q2M1Z3 1444 aa10.88□□□□□ -0.67
KCNMA1-270ENST00000639730 SLIT1O75093 1534 aa10.88□□□□□ -0.67
KCNMA1-270ENST00000639730 DHX57Q6P158 1386 aaKnown RBP10.88□□□□□ -0.67
KCNMA1-270ENST00000639730 RAPGEF3O95398 923 aa10.86□□□□□ -0.67
KCNMA1-270ENST00000639730 IRX6P78412 446 aaPredicted RBP10.86□□□□□ -0.67
KCNMA1-270ENST00000639730 DDX10Q13206 875 aaKnown RBP10.86□□□□□ -0.67
KCNMA1-270ENST00000639730 ABCC3O15438 1527 aa10.86□□□□□ -0.67
KCNMA1-270ENST00000639730 SYCP2Q9BX26 1530 aa10.86□□□□□ -0.67
KCNMA1-270ENST00000639730 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
KCNMA1-270ENST00000639730 HFM1A2PYH4 1435 aa10.85□□□□□ -0.67
KCNMA1-270ENST00000639730 MED1Q15648 1581 aaPredicted RBP10.85□□□□□ -0.67
KCNMA1-270ENST00000639730 ARHGAP23Q9P227 1491 aa10.85□□□□□ -0.67
KCNMA1-270ENST00000639730 MBD5Q9P267 1494 aa10.85□□□□□ -0.67
KCNMA1-270ENST00000639730 PRDM15P57071 1507 aaPredicted RBP10.85□□□□□ -0.67
KCNMA1-270ENST00000639730 UGGT1Q9NYU2 1555 aa10.84□□□□□ -0.67
KCNMA1-270ENST00000639730 DAPK1P53355 1430 aa10.84□□□□□ -0.67
KCNMA1-270ENST00000639730 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
KCNMA1-270ENST00000639730 UBR1Q8IWV7 1749 aa10.83□□□□□ -0.68
KCNMA1-270ENST00000639730 CCDC141Q6ZP82 1450 aa10.83□□□□□ -0.68
KCNMA1-270ENST00000639730 DIP2AQ14689 1571 aa10.83□□□□□ -0.68
KCNMA1-270ENST00000639730 RAB3GAP2Q9H2M9 1393 aa10.83□□□□□ -0.68
KCNMA1-270ENST00000639730 GCC2Q8IWJ2 1684 aa10.82□□□□□ -0.68
KCNMA1-270ENST00000639730 DHX29Q7Z478 1369 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-270ENST00000639730 NBR1Q14596 966 aa10.81□□□□□ -0.68
KCNMA1-270ENST00000639730 HIRIP3Q9BW71 556 aaPredicted RBP10.81□□□□□ -0.68
KCNMA1-270ENST00000639730 ABCC5O15440 1437 aa10.81□□□□□ -0.68
KCNMA1-270ENST00000639730 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
KCNMA1-270ENST00000639730 MROH1Q8NDA8 1641 aa10.8□□□□□ -0.68
KCNMA1-270ENST00000639730 CCDC136Q96JN2 1154 aa10.8□□□□□ -0.68
KCNMA1-270ENST00000639730 ADGRL2O95490 1459 aa10.8□□□□□ -0.68
KCNMA1-270ENST00000639730 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
KCNMA1-270ENST00000639730 NAIPQ13075 1403 aa10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 ALKQ9UM73 1620 aa10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 ZMYM3Q14202 1370 aa10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 DUOX2Q9NRD8 1548 aa10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 ZNF777Q9ULD5 760 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 ARID4BQ4LE39 1312 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 TSPY4P0CV99 314 aa10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 TSPY10P0CW01 314 aa10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 ANKRD30AQ9BXX3 1397 aa10.79□□□□□ -0.68
KCNMA1-270ENST00000639730 NKTRP30414 1462 aaKnown RBP10.77□□□□□ -0.68
KCNMA1-270ENST00000639730 ERBINQ96RT1 1412 aa10.77□□□□□ -0.69
KCNMA1-270ENST00000639730 LAMC1P11047 1609 aa10.77□□□□□ -0.69
KCNMA1-270ENST00000639730 XIRP1Q702N8 1843 aaKnown RBP10.76□□□□□ -0.69
KCNMA1-270ENST00000639730 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
KCNMA1-270ENST00000639730 RPRD2Q5VT52 1461 aaKnown RBP10.75□□□□□ -0.69
KCNMA1-270ENST00000639730 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
KCNMA1-270ENST00000639730 CHIC2Q9UKJ5 165 aa10.74□□□□□ -0.69
KCNMA1-270ENST00000639730 ERVK-7P63135 1459 aa10.73□□□□□ -0.69
KCNMA1-270ENST00000639730 SHPRHQ149N8 1683 aa10.73□□□□□ -0.69
KCNMA1-270ENST00000639730 RRP7BPQ9NSQ0 103 aa10.72□□□□□ -0.69
KCNMA1-270ENST00000639730 TNRQ92752 1358 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms