RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 MRS2Q9HD23 443 aa26.06■■□□□ 1.76
CROCCP2-206ENST00000639594 KDM2AQ9Y2K7 1162 aa26.06■■□□□ 1.76
CROCCP2-206ENST00000639594 ABCA9Q8IUA7 1624 aa26.06■■□□□ 1.76
CROCCP2-206ENST00000639594 PLXNC1O60486 1568 aa26.05■■□□□ 1.76
CROCCP2-206ENST00000639594 TSHZ2Q9NRE2 1034 aa26.05■■□□□ 1.76
CROCCP2-206ENST00000639594 DHX29Q7Z478 1369 aaKnown RBP26.04■■□□□ 1.76
CROCCP2-206ENST00000639594 FAM9BQ8IZU0 186 aa26.03■■□□□ 1.76
CROCCP2-206ENST00000639594 DCAF11Q8TEB1 546 aa26.03■■□□□ 1.76
CROCCP2-206ENST00000639594 PLEKHH2Q8IVE3 1493 aa26.03■■□□□ 1.76
CROCCP2-206ENST00000639594 POLR3GLQ9BT43 218 aa26.03■■□□□ 1.76
CROCCP2-206ENST00000639594 CARD11Q9BXL7 1154 aa26.03■■□□□ 1.76
CROCCP2-206ENST00000639594 ARID4BQ4LE39 1312 aaPredicted RBP26■■□□□ 1.75
CROCCP2-206ENST00000639594 EFCAB2Q5VUJ9 269 aa25.99■■□□□ 1.75
CROCCP2-206ENST00000639594 IQGAP3Q86VI3 1631 aa25.99■■□□□ 1.75
CROCCP2-206ENST00000639594 ABCC1P33527 1531 aa25.98■■□□□ 1.75
CROCCP2-206ENST00000639594 ARAP3Q8WWN8 1544 aa25.98■■□□□ 1.75
CROCCP2-206ENST00000639594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.97■■□□□ 1.754e-7■□□□□ 11.2
CROCCP2-206ENST00000639594 CCDC144AA2RUR9 1427 aa25.96■■□□□ 1.75
CROCCP2-206ENST00000639594 TRPM1Q7Z4N2 1603 aa25.95■■□□□ 1.75
CROCCP2-206ENST00000639594 PLA2R1Q13018 1463 aa25.95■■□□□ 1.75
CROCCP2-206ENST00000639594 DUOX2Q9NRD8 1548 aa25.95■■□□□ 1.74
CROCCP2-206ENST00000639594 ST20-MTHFSA0A0A6YYL1 179 aa25.93■■□□□ 1.74
CROCCP2-206ENST00000639594 FANCAO15360 1455 aa25.92■■□□□ 1.74
CROCCP2-206ENST00000639594 CNGB1Q14028 1251 aaPredicted RBP25.92■■□□□ 1.74
CROCCP2-206ENST00000639594 TRAPPC8Q9Y2L5 1435 aa25.91■■□□□ 1.74
CROCCP2-206ENST00000639594 ROCK2O75116 1388 aaKnown RBP25.91■■□□□ 1.74
CROCCP2-206ENST00000639594 PRAG1Q86YV5 1406 aa25.9■■□□□ 1.74
CROCCP2-206ENST00000639594 ZBED9Q6R2W3 1325 aa25.89■■□□□ 1.74
CROCCP2-206ENST00000639594 MAGI2Q86UL8 1455 aa25.88■■□□□ 1.73
CROCCP2-206ENST00000639594 RGL3Q3MIN7 710 aa25.88■■□□□ 1.73
CROCCP2-206ENST00000639594 ERBINQ96RT1 1412 aa25.88■■□□□ 1.73
CROCCP2-206ENST00000639594 E9PCH4 1651 aa25.87■■□□□ 1.73
CROCCP2-206ENST00000639594 A2MP01023 1474 aa25.86■■□□□ 1.73
CROCCP2-206ENST00000639594 IRX6P78412 446 aaPredicted RBP25.85■■□□□ 1.73
CROCCP2-206ENST00000639594 CD109Q6YHK3 1445 aa25.83■■□□□ 1.73
CROCCP2-206ENST00000639594 AFAP1Q8N556 730 aa25.83■■□□□ 1.73
CROCCP2-206ENST00000639594 ADGRL1O94910 1474 aa25.81■■□□□ 1.72
CROCCP2-206ENST00000639594 NBPF1Q3BBV0 1214 aa25.8■■□□□ 1.72
CROCCP2-206ENST00000639594 ATP10AO60312 1499 aa25.8■■□□□ 1.72
CROCCP2-206ENST00000639594 LAMC1P11047 1609 aa25.78■■□□□ 1.72
CROCCP2-206ENST00000639594 SCAPERQ9BY12 1400 aa25.78■■□□□ 1.72
CROCCP2-206ENST00000639594 GPRASP1Q5JY77 1395 aa25.77■■□□□ 1.72
CROCCP2-206ENST00000639594 ZFYVE16Q7Z3T8 1539 aa25.76■■□□□ 1.71
CROCCP2-206ENST00000639594 EIF2AK4Q9P2K8 1649 aaKnown RBP25.75■■□□□ 1.71
CROCCP2-206ENST00000639594 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
CROCCP2-206ENST00000639594 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
CROCCP2-206ENST00000639594 RTEL1-TNFRSF6BF6WH68 1400 aa25.72■■□□□ 1.71
CROCCP2-206ENST00000639594 MAP3K4Q9Y6R4 1608 aa25.72■■□□□ 1.71
CROCCP2-206ENST00000639594 PNISRQ8TF01 805 aaKnown RBP25.71■■□□□ 1.71
CROCCP2-206ENST00000639594 INO80Q9ULG1 1556 aaPredicted RBP25.71■■□□□ 1.71
CROCCP2-206ENST00000639594 CFAP74Q9C0B2 1584 aa25.7■■□□□ 1.7
CROCCP2-206ENST00000639594 TMC1Q8TDI8 760 aa25.7■■□□□ 1.7
CROCCP2-206ENST00000639594 ERICH6BQ5W0A0 696 aa25.69■■□□□ 1.7
CROCCP2-206ENST00000639594 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
CROCCP2-206ENST00000639594 DIP2BQ9P265 1576 aa25.68■■□□□ 1.7
CROCCP2-206ENST00000639594 DEPDC5O75140 1603 aa25.67■■□□□ 1.7
CROCCP2-206ENST00000639594 GLI2P10070 1586 aa25.67■■□□□ 1.7
CROCCP2-206ENST00000639594 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
CROCCP2-206ENST00000639594 RALBP1Q15311 655 aa25.67■■□□□ 1.7
CROCCP2-206ENST00000639594 SPHKAPQ2M3C7 1700 aa25.67■■□□□ 1.7
CROCCP2-206ENST00000639594 RNF17Q9BXT8 1623 aaKnown RBP25.67■■□□□ 1.7
CROCCP2-206ENST00000639594 COL17A1Q9UMD9 1497 aaPredicted RBP25.66■■□□□ 1.7
CROCCP2-206ENST00000639594 MYBBP1AQ9BQG0 1328 aaKnown RBP25.66■■□□□ 1.7
CROCCP2-206ENST00000639594 CEP152O94986 1710 aa25.65■■□□□ 1.7
CROCCP2-206ENST00000639594 SMG6Q86US8 1419 aaKnown RBP25.65■■□□□ 1.7
CROCCP2-206ENST00000639594 TESK2Q96S53 571 aa25.65■■□□□ 1.7
CROCCP2-206ENST00000639594 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.7
CROCCP2-206ENST00000639594 KIDINS220Q9ULH0 1771 aa25.64■■□□□ 1.69
CROCCP2-206ENST00000639594 DISP3Q9P2K9 1392 aa25.63■■□□□ 1.69
CROCCP2-206ENST00000639594 PPP4R2Q9NY27 417 aa25.63■■□□□ 1.69
CROCCP2-206ENST00000639594 FAM69CQ0P6D2 419 aa25.62■■□□□ 1.69
CROCCP2-206ENST00000639594 TRPM2O94759 1503 aa25.62■■□□□ 1.69
CROCCP2-206ENST00000639594 ZNF518AQ6AHZ1 1483 aa25.62■■□□□ 1.69
CROCCP2-206ENST00000639594 LRPPRCP42704 1394 aaKnown RBP25.61■■□□□ 1.69
CROCCP2-206ENST00000639594 TET3O43151 1660 aa25.61■■□□□ 1.69
CROCCP2-206ENST00000639594 POGZQ7Z3K3 1410 aa25.61■■□□□ 1.69
CROCCP2-206ENST00000639594 MADDQ8WXG6 1647 aa25.61■■□□□ 1.69
CROCCP2-206ENST00000639594 NEO1Q92859 1461 aa25.61■■□□□ 1.69
CROCCP2-206ENST00000639594 TSPOAP1O95153 1857 aa25.6■■□□□ 1.69
CROCCP2-206ENST00000639594 SENP3-EIF4A1A0A087X0R7 540 aa25.6■■□□□ 1.69
CROCCP2-206ENST00000639594 CLTCL1P53675 1640 aa25.6■■□□□ 1.69
CROCCP2-206ENST00000639594 PER1O15534 1290 aaPredicted RBP25.59■■□□□ 1.69
CROCCP2-206ENST00000639594 MYT1LQ9UL68 1186 aa25.59■■□□□ 1.69
CROCCP2-206ENST00000639594 RBM19Q9Y4C8 960 aaKnown RBP25.59■■□□□ 1.69
CROCCP2-206ENST00000639594 NUDCQ9Y266 331 aa25.59■■□□□ 1.69
CROCCP2-206ENST00000639594 PARD3Q8TEW0 1356 aa25.58■■□□□ 1.69
CROCCP2-206ENST00000639594 PTPRTO14522 1441 aa25.57■■□□□ 1.68
CROCCP2-206ENST00000639594 IQGAP1P46940 1657 aa25.56■■□□□ 1.68
CROCCP2-206ENST00000639594 PPRC1Q5VV67 1664 aaKnown RBP25.55■■□□□ 1.68
CROCCP2-206ENST00000639594 VWDEQ8N2E2 1590 aa25.55■■□□□ 1.68
CROCCP2-206ENST00000639594 RAPGEF3O95398 923 aa25.55■■□□□ 1.68
CROCCP2-206ENST00000639594 KIF13AQ9H1H9 1805 aa25.54■■□□□ 1.68
CROCCP2-206ENST00000639594 TMF1P82094 1093 aa25.54■■□□□ 1.68
CROCCP2-206ENST00000639594 RICTORQ6R327 1708 aa25.52■■□□□ 1.68
CROCCP2-206ENST00000639594 NLRP13Q86W25 1043 aa25.52■■□□□ 1.68
CROCCP2-206ENST00000639594 HECW2Q9P2P5 1572 aa25.51■■□□□ 1.67
CROCCP2-206ENST00000639594 KANK1Q14678 1352 aa25.51■■□□□ 1.67
CROCCP2-206ENST00000639594 KIF3BO15066 747 aa25.51■■□□□ 1.67
CROCCP2-206ENST00000639594 PANK3Q9H999 370 aa25.51■■□□□ 1.67
CROCCP2-206ENST00000639594 MROH1Q8NDA8 1641 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms