RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, humanhuman

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-222ENST00000639447 MAST1Q9Y2H9 1570 aa23.24■■□□□ 1.31
GRN-222ENST00000639447 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
GRN-222ENST00000639447 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
GRN-222ENST00000639447 PLA2R1Q13018 1463 aa23.23■■□□□ 1.31
GRN-222ENST00000639447 PZPP20742 1482 aa23.21■■□□□ 1.31
GRN-222ENST00000639447 A2ML1A8K2U0 1454 aa23.19■■□□□ 1.3
GRN-222ENST00000639447 APLP2Q06481 763 aa23.18■■□□□ 1.3
GRN-222ENST00000639447 TNRQ92752 1358 aa23.17■■□□□ 1.3
GRN-222ENST00000639447 RNF17Q9BXT8 1623 aaKnown RBP23.17■■□□□ 1.3
GRN-222ENST00000639447 EIF2AK4Q9P2K8 1649 aaKnown RBP23.16■■□□□ 1.3
GRN-222ENST00000639447 WASHC2CQ9Y4E1 1318 aa23.16■■□□□ 1.3
GRN-222ENST00000639447 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
GRN-222ENST00000639447 LTBP4Q8N2S1 1624 aa23.16■■□□□ 1.3
GRN-222ENST00000639447 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
GRN-222ENST00000639447 DNMT1P26358 1616 aaKnown RBP23.13■■□□□ 1.29
GRN-222ENST00000639447 PKD2Q13563 968 aa23.13■■□□□ 1.29
GRN-222ENST00000639447 ZC3H13Q5T200 1668 aaKnown RBP23.13■■□□□ 1.29
GRN-222ENST00000639447 IQSEC2Q5JU85 1478 aa23.12■■□□□ 1.29
GRN-222ENST00000639447 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
GRN-222ENST00000639447 ABCC3O15438 1527 aa23.11■■□□□ 1.29
GRN-222ENST00000639447 PTPN23Q9H3S7 1636 aa23.11■■□□□ 1.29
GRN-222ENST00000639447 CROCC2H7BZ55 1655 aa23.1■■□□□ 1.29
GRN-222ENST00000639447 DUOX2Q9NRD8 1548 aa23.1■■□□□ 1.29
GRN-222ENST00000639447 FBXO31Q5XUX0 539 aaPredicted RBP23.09■■□□□ 1.29
GRN-222ENST00000639447 NLRP1Q9C000 1473 aa23.08■■□□□ 1.29
GRN-222ENST00000639447 MROH1Q8NDA8 1641 aa23.07■■□□□ 1.28
GRN-222ENST00000639447 FGD6Q6ZV73 1430 aa23.06■■□□□ 1.28
GRN-222ENST00000639447 POLR1AO95602 1720 aaPredicted RBP23.05■■□□□ 1.28
GRN-222ENST00000639447 ABCC5O15440 1437 aa23.05■■□□□ 1.28
GRN-222ENST00000639447 KIF15Q9NS87 1388 aa23.05■■□□□ 1.28
GRN-222ENST00000639447 ZNF335Q9H4Z2 1342 aaPredicted RBP23.05■■□□□ 1.28
GRN-222ENST00000639447 DAPK1P53355 1430 aa23.03■■□□□ 1.28
GRN-222ENST00000639447 ERBINQ96RT1 1412 aa23.03■■□□□ 1.28
GRN-222ENST00000639447 SPATA31D1Q6ZQQ2 1576 aa23.03■■□□□ 1.28
GRN-222ENST00000639447 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
GRN-222ENST00000639447 UGGT1Q9NYU2 1555 aa23.02■■□□□ 1.28
GRN-222ENST00000639447 PRDM15P57071 1507 aaPredicted RBP23.02■■□□□ 1.28
GRN-222ENST00000639447 ERVK-7P63135 1459 aa23.02■■□□□ 1.27
GRN-222ENST00000639447 CEP152O94986 1710 aa23.01■■□□□ 1.27
GRN-222ENST00000639447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.98■■□□□ 1.274e-11■■■■■ 30.2
GRN-222ENST00000639447 THEMISQ8N1K5 641 aaPredicted RBP22.96■■□□□ 1.27
GRN-222ENST00000639447 RRP7BPQ9NSQ0 103 aa22.96■■□□□ 1.27
GRN-222ENST00000639447 ANKLE2Q86XL3 938 aa22.94■■□□□ 1.26
GRN-222ENST00000639447 DEPDC5O75140 1603 aa22.94■■□□□ 1.26
GRN-222ENST00000639447 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
GRN-222ENST00000639447 CPS1P31327 1500 aa22.92■■□□□ 1.26
GRN-222ENST00000639447 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
GRN-222ENST00000639447 KANK1Q14678 1352 aa22.9■■□□□ 1.26
GRN-222ENST00000639447 ARHGAP31Q2M1Z3 1444 aa22.9■■□□□ 1.26
GRN-222ENST00000639447 MED14O60244 1454 aa22.9■■□□□ 1.26
GRN-222ENST00000639447 IQGAP1P46940 1657 aa22.88■■□□□ 1.25
GRN-222ENST00000639447 ADGRL2O95490 1459 aa22.87■■□□□ 1.25
GRN-222ENST00000639447 UBAP1LF5GYI3 381 aa22.87■■□□□ 1.25
GRN-222ENST00000639447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.87■■□□□ 1.25
GRN-222ENST00000639447 CHIC2Q9UKJ5 165 aa22.87■■□□□ 1.25
GRN-222ENST00000639447 VWDEQ8N2E2 1590 aa22.86■■□□□ 1.25
GRN-222ENST00000639447 UBR1Q8IWV7 1749 aa22.86■■□□□ 1.25
GRN-222ENST00000639447 LMTK2Q8IWU2 1503 aa22.85■■□□□ 1.25
GRN-222ENST00000639447 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
GRN-222ENST00000639447 SCAF11Q99590 1463 aaKnown RBP22.82■■□□□ 1.24
GRN-222ENST00000639447 DISP3Q9P2K9 1392 aa22.82■■□□□ 1.24
GRN-222ENST00000639447 EFCAB6Q5THR3 1501 aa22.8■■□□□ 1.24
GRN-222ENST00000639447 SLIT1O75093 1534 aa22.79■■□□□ 1.24
GRN-222ENST00000639447 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
GRN-222ENST00000639447 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
GRN-222ENST00000639447 SYNMO15061 1565 aa22.78■■□□□ 1.24
GRN-222ENST00000639447 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
GRN-222ENST00000639447 CFAP65Q6ZU64 1925 aaKnown RBP22.75■■□□□ 1.23
GRN-222ENST00000639447 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
GRN-222ENST00000639447 STAG3Q9UJ98 1225 aa22.73■■□□□ 1.23
GRN-222ENST00000639447 KDM5AP29375 1690 aaKnown RBP22.73■■□□□ 1.23
GRN-222ENST00000639447 TOM1O60784 492 aa22.72■■□□□ 1.23
GRN-222ENST00000639447 EID1Q9Y6B2 187 aa22.72■■□□□ 1.23
GRN-222ENST00000639447 TXNDC2Q86VQ3 553 aa22.71■■□□□ 1.23
GRN-222ENST00000639447 TMEM2Q9UHN6 1383 aa22.71■■□□□ 1.23
GRN-222ENST00000639447 NOS1P29475 1434 aa22.7■■□□□ 1.23
GRN-222ENST00000639447 ADGRB3O60242 1522 aa22.7■■□□□ 1.22
GRN-222ENST00000639447 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.22
GRN-222ENST00000639447 RPRD2Q5VT52 1461 aaKnown RBP22.69■■□□□ 1.22
GRN-222ENST00000639447 PIP4K2BP78356 416 aa22.69■■□□□ 1.22
GRN-222ENST00000639447 STRCP1A6NGW2 1772 aa22.69■■□□□ 1.22
GRN-222ENST00000639447 UNC13BO14795 1591 aa22.68■■□□□ 1.22
GRN-222ENST00000639447 LTKP29376 864 aa22.68■■□□□ 1.22
GRN-222ENST00000639447 TET3O43151 1660 aa22.68■■□□□ 1.22
GRN-222ENST00000639447 IDI1Q13907 227 aa22.65■■□□□ 1.22
GRN-222ENST00000639447 ROCK1Q13464 1354 aa22.65■■□□□ 1.22
GRN-222ENST00000639447 ALKQ9UM73 1620 aa22.63■■□□□ 1.21
GRN-222ENST00000639447 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
GRN-222ENST00000639447 SLC52A1Q9NWF4 448 aa22.62■■□□□ 1.21
GRN-222ENST00000639447 HSPA1LP34931 641 aa22.61■■□□□ 1.21
GRN-222ENST00000639447 ILDR2Q71H61 639 aa22.58■■□□□ 1.21
GRN-222ENST00000639447 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
GRN-222ENST00000639447 ITGAEP38570 1179 aa22.56■■□□□ 1.2
GRN-222ENST00000639447 MED1Q15648 1581 aaPredicted RBP22.54■■□□□ 1.2
GRN-222ENST00000639447 E9PCH4 1651 aa22.54■■□□□ 1.2
GRN-222ENST00000639447 PPARGC1BQ86YN6 1023 aaKnown RBP22.54■■□□□ 1.2
GRN-222ENST00000639447 NWD1Q149M9 1564 aa22.52■■□□□ 1.2
GRN-222ENST00000639447 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
GRN-222ENST00000639447 TMEM131LA2VDJ0 1609 aa22.51■■□□□ 1.19
GRN-222ENST00000639447 NKTRP30414 1462 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms