RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CCDC97Q96F63 343 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-209ENST00000639244 GZF1Q9H116 711 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-209ENST00000639244 ZRSR2Q15696 482 aaKnown RBP5.45□□□□□ -1.54
SCN3A-209ENST00000639244 SLC20A2Q08357 652 aa5.45□□□□□ -1.54
SCN3A-209ENST00000639244 SETDB1Q15047 1291 aa5.45□□□□□ -1.54
SCN3A-209ENST00000639244 TMX4Q9H1E5 349 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-209ENST00000639244 HIRIP3Q9BW71 556 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-209ENST00000639244 POLD1P28340 1107 aa5.44□□□□□ -1.54
SCN3A-209ENST00000639244 ZNF830Q96NB3 372 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-209ENST00000639244 TNNT3P45378 269 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-209ENST00000639244 RIPOR2Q9Y4F9 1068 aa5.44□□□□□ -1.54
SCN3A-209ENST00000639244 L1TD1Q5T7N2 865 aaKnown RBP5.44□□□□□ -1.54
SCN3A-209ENST00000639244 CARD10Q9BWT7 1032 aa5.44□□□□□ -1.54
SCN3A-209ENST00000639244 ERCC3P19447 782 aa5.44□□□□□ -1.54
SCN3A-209ENST00000639244 RBM26Q5T8P6 1007 aaKnown RBP5.43□□□□□ -1.54
SCN3A-209ENST00000639244 LMOD3Q0VAK6 560 aa5.43□□□□□ -1.54
SCN3A-209ENST00000639244 CXorf38Q8TB03 319 aa5.43□□□□□ -1.54
SCN3A-209ENST00000639244 CCDC125Q86Z20 511 aa5.43□□□□□ -1.54
SCN3A-209ENST00000639244 GTPBP4Q9BZE4 634 aaKnown RBP5.43□□□□□ -1.54
SCN3A-209ENST00000639244 SMARCA5O60264 1052 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-209ENST00000639244 FBXW7Q969H0 707 aa5.42□□□□□ -1.54
SCN3A-209ENST00000639244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-209ENST00000639244 HNRNPUL2Q1KMD3 747 aaKnown RBP5.42□□□□□ -1.54
SCN3A-209ENST00000639244 NUB1Q9Y5A7 615 aa5.42□□□□□ -1.54
SCN3A-209ENST00000639244 SUDS3Q9H7L9 328 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-209ENST00000639244 BSDC1Q9NW68 430 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-209ENST00000639244 CCDC66A2RUB6 948 aa5.42□□□□□ -1.54
SCN3A-209ENST00000639244 RAI14Q9P0K7 980 aa5.42□□□□□ -1.54
SCN3A-209ENST00000639244 BRPF1P55201 1214 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-209ENST00000639244 WASHC2AQ641Q2 1341 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 SEMA3FQ13275 785 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 TMEM51Q9NW97 253 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 FEZ2Q9UHY8 353 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-209ENST00000639244 ZRANB2O95218 330 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCN3A-209ENST00000639244 MSL3Q8N5Y2 521 aaKnown RBP5.41□□□□□ -1.54
SCN3A-209ENST00000639244 ZNF513Q8N8E2 541 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-209ENST00000639244 ZBTB12Q9Y330 459 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-209ENST00000639244 DMTNQ08495 405 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 SATB1Q01826 763 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 CCDC181Q5TID7 509 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 FRMD4BQ9Y2L6 1034 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 IPO9Q96P70 1041 aaKnown RBP5.41□□□□□ -1.54
SCN3A-209ENST00000639244 TPD52L2O43399 206 aaKnown RBP5.41□□□□□ -1.54
SCN3A-209ENST00000639244 MNS1Q8NEH6 495 aa5.41□□□□□ -1.54
SCN3A-209ENST00000639244 BRD1O95696 1058 aa5.4□□□□□ -1.54
SCN3A-209ENST00000639244 MYCBPQ99417 103 aaPredicted RBP5.4□□□□□ -1.55
SCN3A-209ENST00000639244 CCER2I3L3R5 266 aa5.4□□□□□ -1.55
SCN3A-209ENST00000639244 MYBPC2Q14324 1141 aa5.4□□□□□ -1.55
SCN3A-209ENST00000639244 PSEN1P49768 467 aa5.4□□□□□ -1.55
SCN3A-209ENST00000639244 CDCA8Q53HL2 280 aa5.39□□□□□ -1.55
SCN3A-209ENST00000639244 SH3BP1Q9Y3L3 701 aa5.39□□□□□ -1.55
SCN3A-209ENST00000639244 NBPF10Q6P3W6 841 aaKnown RBP5.39□□□□□ -1.55
SCN3A-209ENST00000639244 DHX16O60231 1041 aaKnown RBP5.39□□□□□ -1.55
SCN3A-209ENST00000639244 MARCH6O60337 910 aa5.39□□□□□ -1.55
SCN3A-209ENST00000639244 CTR9Q6PD62 1173 aa5.39□□□□□ -1.55
SCN3A-209ENST00000639244 SLC52A1Q9NWF4 448 aa5.38□□□□□ -1.55
SCN3A-209ENST00000639244 FAM210AQ96ND0 272 aa5.38□□□□□ -1.55
SCN3A-209ENST00000639244 MPHOSPH10O00566 681 aaKnown RBP5.38□□□□□ -1.55
SCN3A-209ENST00000639244 ZKSCAN8Q15776 578 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-209ENST00000639244 TSPAN18Q96SJ8 248 aa5.38□□□□□ -1.55
SCN3A-209ENST00000639244 C1orf115Q9H7X2 142 aa5.38□□□□□ -1.55
SCN3A-209ENST00000639244 CLCN1P35523 988 aa5.38□□□□□ -1.55
SCN3A-209ENST00000639244 RPAINQ86UA6 219 aa5.38□□□□□ -1.55
SCN3A-209ENST00000639244 RBM27Q9P2N5 1060 aaKnown RBP5.38□□□□□ -1.55
SCN3A-209ENST00000639244 NAP1L1P55209 391 aaKnown RBP5.38□□□□□ -1.55
SCN3A-209ENST00000639244 LMOD2Q6P5Q4 547 aa5.38□□□□□ -1.55
SCN3A-209ENST00000639244 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCN3A-209ENST00000639244 SETSIPP0DME0 302 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-209ENST00000639244 TRHP20396 242 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-209ENST00000639244 HSP90AB2PQ58FF8 381 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 LIG1P18858 919 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 CREBRFQ8IUR6 639 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 CEP83Q9Y592 693 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 HMGN5P82970 282 aaKnown RBP5.37□□□□□ -1.55
SCN3A-209ENST00000639244 NBPF3Q9H094 633 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 WDR70Q9NW82 654 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 GOLGA6L6A8MZA4 724 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 ZNF500O60304 480 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-209ENST00000639244 CCDC96Q2M329 555 aa5.37□□□□□ -1.55
SCN3A-209ENST00000639244 KIF1CO43896 1103 aaKnown RBP5.36□□□□□ -1.55
SCN3A-209ENST00000639244 CCDC172P0C7W6 258 aa5.36□□□□□ -1.55
SCN3A-209ENST00000639244 LONRF3Q496Y0 759 aa5.36□□□□□ -1.55
SCN3A-209ENST00000639244 MIER1Q8N108 512 aa5.36□□□□□ -1.55
SCN3A-209ENST00000639244 TDO2P48775 406 aa5.36□□□□□ -1.55
SCN3A-209ENST00000639244 ZCRB1Q8TBF4 217 aaKnown RBP5.36□□□□□ -1.55
SCN3A-209ENST00000639244 CGNQ9P2M7 1197 aaKnown RBP5.36□□□□□ -1.55
SCN3A-209ENST00000639244 KNSTRNQ9Y448 316 aa5.36□□□□□ -1.55
SCN3A-209ENST00000639244 NEFHP12036 1026 aa5.36□□□□□ -1.55
SCN3A-209ENST00000639244 IPO7O95373 1038 aaKnown RBP5.35□□□□□ -1.55
SCN3A-209ENST00000639244 ANAPC4Q9UJX5 808 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 PES1O00541 588 aaKnown RBP5.35□□□□□ -1.55
SCN3A-209ENST00000639244 MTA1Q13330 715 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 FOXD1Q16676 465 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 PPP1R1BQ9UD71 204 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-209ENST00000639244 CADPSQ9ULU8 1353 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 KIF3AQ9Y496 699 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 PPME1Q9Y570 386 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 ZCCHC6Q5VYS8 1495 aaKnown RBP5.35□□□□□ -1.55
SCN3A-209ENST00000639244 GOLGA6CA6NDK9 693 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms