RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 PPP1R3GB7ZBB8 358 aa8.58□□□□□ -1.04
ATM-228ENST00000639240 PDIA6Q15084 440 aa8.58□□□□□ -1.04
ATM-228ENST00000639240 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
ATM-228ENST00000639240 E2F4Q16254 413 aa8.57□□□□□ -1.04
ATM-228ENST00000639240 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
ATM-228ENST00000639240 RBM33Q96EV2 1170 aaKnown RBP8.57□□□□□ -1.04
ATM-228ENST00000639240 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
ATM-228ENST00000639240 ARIH1Q9Y4X5 557 aaPredicted RBP8.56□□□□□ -1.04
ATM-228ENST00000639240 EPAS1Q99814 870 aa8.55□□□□□ -1.04
ATM-228ENST00000639240 PTPN5P54829 565 aa8.54□□□□□ -1.04
ATM-228ENST00000639240 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
ATM-228ENST00000639240 THSD4Q6ZMP0 1018 aa8.54□□□□□ -1.04
ATM-228ENST00000639240 STAC3Q96MF2 364 aa8.54□□□□□ -1.04
ATM-228ENST00000639240 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
ATM-228ENST00000639240 RABGEF1Q9UJ41 708 aa8.53□□□□□ -1.04
ATM-228ENST00000639240 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
ATM-228ENST00000639240 KIAA1468Q9P260 1216 aa8.52□□□□□ -1.05
ATM-228ENST00000639240 NBR1Q14596 966 aa8.51□□□□□ -1.05
ATM-228ENST00000639240 WNT2BQ93097 391 aa8.51□□□□□ -1.05
ATM-228ENST00000639240 SPDYE16A6NNV3 312 aaPredicted RBP8.5□□□□□ -1.05
ATM-228ENST00000639240 C3orf80F5H4A9 247 aa8.49□□□□□ -1.05
ATM-228ENST00000639240 WDR70Q9NW82 654 aa8.49□□□□□ -1.05
ATM-228ENST00000639240 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
ATM-228ENST00000639240 TSKSQ9UJT2 592 aa8.49□□□□□ -1.05
ATM-228ENST00000639240 GRXCR2A6NFK2 248 aa8.48□□□□□ -1.05
ATM-228ENST00000639240 TRIM6-TRIM34B2RNG4 842 aa8.48□□□□□ -1.05
ATM-228ENST00000639240 OSBPP22059 807 aa8.48□□□□□ -1.05
ATM-228ENST00000639240 NBPF3Q9H094 633 aa8.48□□□□□ -1.05
ATM-228ENST00000639240 SEPT9Q9UHD8 586 aaPredicted RBP8.48□□□□□ -1.05
ATM-228ENST00000639240 ONECUT3O60422 494 aaPredicted RBP8.47□□□□□ -1.05
ATM-228ENST00000639240 GOLGA8CPA6NN73 597 aa8.46□□□□□ -1.06
ATM-228ENST00000639240 MAP3K7O43318 606 aa8.46□□□□□ -1.06
ATM-228ENST00000639240 BCAMP50895 628 aa8.46□□□□□ -1.06
ATM-228ENST00000639240 CDHR5Q9HBB8 845 aa8.46□□□□□ -1.06
ATM-228ENST00000639240 ZFRQ96KR1 1074 aaKnown RBP8.45□□□□□ -1.06
ATM-228ENST00000639240 LAPTM4BQ86VI4 370 aa8.43□□□□□ -1.06
ATM-228ENST00000639240 KCNV2Q8TDN2 545 aa8.43□□□□□ -1.06
ATM-228ENST00000639240 SOWAHBA6NEL2 793 aa8.42□□□□□ -1.06
ATM-228ENST00000639240 CDCA7LQ96GN5 454 aa8.42□□□□□ -1.06
ATM-228ENST00000639240 NPDC1Q9NQX5 325 aaPredicted RBP8.42□□□□□ -1.06
ATM-228ENST00000639240 SMAPO00193 183 aa8.41□□□□□ -1.06
ATM-228ENST00000639240 MLLT3P42568 568 aaPredicted RBP8.41□□□□□ -1.06
ATM-228ENST00000639240 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
ATM-228ENST00000639240 PRSS12P56730 875 aa8.4□□□□□ -1.06
ATM-228ENST00000639240 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.06
ATM-228ENST00000639240 ANKK1Q8NFD2 765 aa8.4□□□□□ -1.06
ATM-228ENST00000639240 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
ATM-228ENST00000639240 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
ATM-228ENST00000639240 IFFO2Q5TF58 517 aa8.37□□□□□ -1.07
ATM-228ENST00000639240 ARHGEF1Q92888 912 aaKnown RBP8.37□□□□□ -1.07
ATM-228ENST00000639240 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
ATM-228ENST00000639240 TTC13Q8NBP0 860 aa8.36□□□□□ -1.07
ATM-228ENST00000639240 TATDN2Q93075 761 aa8.35□□□□□ -1.07
ATM-228ENST00000639240 CERKQ8TCT0 537 aa8.34□□□□□ -1.07
ATM-228ENST00000639240 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
ATM-228ENST00000639240 SAMD7Q7Z3H4 446 aa8.33□□□□□ -1.08
ATM-228ENST00000639240 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
ATM-228ENST00000639240 PNMA3Q9UL41 463 aa8.33□□□□□ -1.08
ATM-228ENST00000639240 HPS5Q9UPZ3 1129 aa8.33□□□□□ -1.08
ATM-228ENST00000639240 A0A0G2JS52 829 aa8.32□□□□□ -1.08
ATM-228ENST00000639240 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
ATM-228ENST00000639240 PADI6Q6TGC4 694 aa8.32□□□□□ -1.08
ATM-228ENST00000639240 NUDT18Q6ZVK8 323 aa8.32□□□□□ -1.08
ATM-228ENST00000639240 LRCH3Q96II8 777 aa8.32□□□□□ -1.08
ATM-228ENST00000639240 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
ATM-228ENST00000639240 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
ATM-228ENST00000639240 SEMA3EO15041 775 aa8.29□□□□□ -1.08
ATM-228ENST00000639240 RGS20O76081 388 aa8.29□□□□□ -1.08
ATM-228ENST00000639240 EYA1Q99502 592 aa8.28□□□□□ -1.08
ATM-228ENST00000639240 NBPF26B4DH59 902 aa8.27□□□□□ -1.09
ATM-228ENST00000639240 PTGDRQ13258 359 aa8.27□□□□□ -1.09
ATM-228ENST00000639240 NYAP1Q6ZVC0 841 aa8.27□□□□□ -1.09
ATM-228ENST00000639240 PPP4CP60510 307 aa8.25□□□□□ -1.09
ATM-228ENST00000639240 FAM161AQ3B820 660 aa8.24□□□□□ -1.09
ATM-228ENST00000639240 TJAP1Q5JTD0 557 aa8.24□□□□□ -1.09
ATM-228ENST00000639240 SWT1Q5T5J6 900 aaKnown RBP8.24□□□□□ -1.09
ATM-228ENST00000639240 KDM2AQ9Y2K7 1162 aa8.24□□□□□ -1.09
ATM-228ENST00000639240 APLP1P51693 650 aa8.23□□□□□ -1.09
ATM-228ENST00000639240 KCNC4Q03721 635 aa8.23□□□□□ -1.09
ATM-228ENST00000639240 TESPA1A2RU30 521 aaPredicted RBP8.2□□□□□ -1.1
ATM-228ENST00000639240 P3H3Q8IVL6 736 aa8.2□□□□□ -1.1
ATM-228ENST00000639240 ZNF516Q92618 1163 aa8.2□□□□□ -1.1
ATM-228ENST00000639240 ADGRG1Q9Y653 693 aa8.2□□□□□ -1.1
ATM-228ENST00000639240 NUTM2FA1L443 756 aa8.19□□□□□ -1.1
ATM-228ENST00000639240 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
ATM-228ENST00000639240 MTRQ99707 1265 aa8.19□□□□□ -1.1
ATM-228ENST00000639240 RNF40O75150 1001 aa8.18□□□□□ -1.1
ATM-228ENST00000639240 FECHP22830 423 aa8.17□□□□□ -1.1
ATM-228ENST00000639240 GPR37O15354 613 aa8.16□□□□□ -1.1
ATM-228ENST00000639240 NKX2-3Q8TAU0 364 aa8.16□□□□□ -1.1
ATM-228ENST00000639240 Q6ZNB5 142 aa8.15□□□□□ -1.1
ATM-228ENST00000639240 VSIG10Q8N0Z9 540 aa8.15□□□□□ -1.1
ATM-228ENST00000639240 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
ATM-228ENST00000639240 HDGFP51858 240 aaKnown RBP8.14□□□□□ -1.11
ATM-228ENST00000639240 TMEM134Q9H6X4 195 aa8.14□□□□□ -1.11
ATM-228ENST00000639240 IL21Q9HBE4 155 aa8.14□□□□□ -1.11
ATM-228ENST00000639240 FCHSD2O94868 740 aa8.13□□□□□ -1.11
ATM-228ENST00000639240 SLF2Q8IX21 1173 aa8.13□□□□□ -1.11
ATM-228ENST00000639240 SLC24A1O60721 1099 aa8.12□□□□□ -1.11
ATM-228ENST00000639240 SLC10A3P09131 477 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms