RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
FAM49B-230ENST00000639004 NPDC1Q9NQX5 325 aaPredicted RBP13.4□□□□□ -0.26
FAM49B-230ENST00000639004 LHX6Q9UPM6 363 aa13.4□□□□□ -0.26
FAM49B-230ENST00000639004 MAP2K5Q13163 448 aa13.39□□□□□ -0.27
FAM49B-230ENST00000639004 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
FAM49B-230ENST00000639004 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
FAM49B-230ENST00000639004 NEUROD2Q15784 382 aa13.36□□□□□ -0.27
FAM49B-230ENST00000639004 ADAM33Q9BZ11 813 aa13.36□□□□□ -0.27
FAM49B-230ENST00000639004 TRIM66O15016 1216 aa13.35□□□□□ -0.27
FAM49B-230ENST00000639004 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
FAM49B-230ENST00000639004 CCDC102AQ96A19 550 aa13.35□□□□□ -0.27
FAM49B-230ENST00000639004 IRF6O14896 467 aa13.34□□□□□ -0.27
FAM49B-230ENST00000639004 PCDH10Q9P2E7 1040 aa13.33□□□□□ -0.28
FAM49B-230ENST00000639004 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
FAM49B-230ENST00000639004 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
FAM49B-230ENST00000639004 PDE4DQ08499 809 aa13.29□□□□□ -0.28
FAM49B-230ENST00000639004 CERKQ8TCT0 537 aa13.29□□□□□ -0.28
FAM49B-230ENST00000639004 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
FAM49B-230ENST00000639004 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
FAM49B-230ENST00000639004 TMEM132AQ24JP5 1023 aa13.25□□□□□ -0.29
FAM49B-230ENST00000639004 AMHR2Q16671 573 aa13.23□□□□□ -0.29
FAM49B-230ENST00000639004 PADI6Q6TGC4 694 aa13.23□□□□□ -0.29
FAM49B-230ENST00000639004 COL9A1P20849 921 aa13.22□□□□□ -0.29
FAM49B-230ENST00000639004 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
FAM49B-230ENST00000639004 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
FAM49B-230ENST00000639004 ST18O60284 1047 aa13.2□□□□□ -0.3
FAM49B-230ENST00000639004 PTPREP23469 700 aa13.2□□□□□ -0.3
FAM49B-230ENST00000639004 KDM4CQ9H3R0 1056 aa13.2□□□□□ -0.3
FAM49B-230ENST00000639004 PRSS12P56730 875 aa13.19□□□□□ -0.3
FAM49B-230ENST00000639004 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
FAM49B-230ENST00000639004 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
FAM49B-230ENST00000639004 FAM161AQ3B820 660 aa13.18□□□□□ -0.3
FAM49B-230ENST00000639004 CDCA7LQ96GN5 454 aa13.18□□□□□ -0.3
FAM49B-230ENST00000639004 PARP9Q8IXQ6 854 aa13.17□□□□□ -0.3
FAM49B-230ENST00000639004 ADGRG1Q9Y653 693 aa13.16□□□□□ -0.3
FAM49B-230ENST00000639004 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
FAM49B-230ENST00000639004 FAM198AQ9UFP1 575 aa13.15□□□□□ -0.3
FAM49B-230ENST00000639004 ERBB3P21860 1342 aa13.14□□□□□ -0.31
FAM49B-230ENST00000639004 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
FAM49B-230ENST00000639004 LCE2DQ5TA82 110 aaPredicted RBP13.13□□□□□ -0.31
FAM49B-230ENST00000639004 METTL3Q86U44 580 aaKnown RBP13.13□□□□□ -0.31
FAM49B-230ENST00000639004 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
FAM49B-230ENST00000639004 OATP04181 439 aa13.12□□□□□ -0.31
FAM49B-230ENST00000639004 EMP3P54852 163 aa13.12□□□□□ -0.31
FAM49B-230ENST00000639004 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
FAM49B-230ENST00000639004 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
FAM49B-230ENST00000639004 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
FAM49B-230ENST00000639004 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
FAM49B-230ENST00000639004 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
FAM49B-230ENST00000639004 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
FAM49B-230ENST00000639004 TRIM6-TRIM34B2RNG4 842 aa13.08□□□□□ -0.32
FAM49B-230ENST00000639004 MDM2Q00987 491 aaPredicted RBP13.08□□□□□ -0.32
FAM49B-230ENST00000639004 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
FAM49B-230ENST00000639004 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
FAM49B-230ENST00000639004 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
FAM49B-230ENST00000639004 CLCN1P35523 988 aa13.07□□□□□ -0.32
FAM49B-230ENST00000639004 PSEN2P49810 448 aa13.07□□□□□ -0.32
FAM49B-230ENST00000639004 PROX2Q3B8N5 592 aa13.07□□□□□ -0.32
FAM49B-230ENST00000639004 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
FAM49B-230ENST00000639004 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
FAM49B-230ENST00000639004 FAM117AQ9C073 453 aa13.07□□□□□ -0.32
FAM49B-230ENST00000639004 C3orf80F5H4A9 247 aa13.06□□□□□ -0.32
FAM49B-230ENST00000639004 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
FAM49B-230ENST00000639004 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
FAM49B-230ENST00000639004 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
FAM49B-230ENST00000639004 ARHGAP33O14559 1287 aa13.05□□□□□ -0.32
FAM49B-230ENST00000639004 ZBED2Q9BTP6 218 aa13.05□□□□□ -0.32
FAM49B-230ENST00000639004 MS4A1P11836 297 aa13.04□□□□□ -0.32
FAM49B-230ENST00000639004 EYA1Q99502 592 aa13.04□□□□□ -0.32
FAM49B-230ENST00000639004 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
FAM49B-230ENST00000639004 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
FAM49B-230ENST00000639004 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
FAM49B-230ENST00000639004 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
FAM49B-230ENST00000639004 NBPF26B4DH59 902 aa13.02□□□□□ -0.33
FAM49B-230ENST00000639004 PACS2Q86VP3 889 aa13.02□□□□□ -0.33
FAM49B-230ENST00000639004 ZNF687Q8N1G0 1237 aa13.02□□□□□ -0.33
FAM49B-230ENST00000639004 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.33
FAM49B-230ENST00000639004 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
FAM49B-230ENST00000639004 PLEKHG3A1L390 1219 aa13.01□□□□□ -0.33
FAM49B-230ENST00000639004 DMRTA1Q5VZB9 504 aa13.01□□□□□ -0.33
FAM49B-230ENST00000639004 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
FAM49B-230ENST00000639004 TATDN2Q93075 761 aa13.01□□□□□ -0.33
FAM49B-230ENST00000639004 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
FAM49B-230ENST00000639004 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
FAM49B-230ENST00000639004 PBX2P40425 430 aa13□□□□□ -0.33
FAM49B-230ENST00000639004 HS3ST6Q96QI5 342 aa13□□□□□ -0.33
FAM49B-230ENST00000639004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.99□□□□□ -0.33
FAM49B-230ENST00000639004 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
FAM49B-230ENST00000639004 SLC4A5Q9BY07 1137 aa12.98□□□□□ -0.33
FAM49B-230ENST00000639004 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
FAM49B-230ENST00000639004 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
FAM49B-230ENST00000639004 SMAPO00193 183 aa12.97□□□□□ -0.33
FAM49B-230ENST00000639004 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
FAM49B-230ENST00000639004 DNAJB2P25686 324 aa12.95□□□□□ -0.34
FAM49B-230ENST00000639004 RABGEF1Q9UJ41 708 aa12.94□□□□□ -0.34
FAM49B-230ENST00000639004 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
FAM49B-230ENST00000639004 VPS9D1Q9Y2B5 631 aa12.92□□□□□ -0.34
FAM49B-230ENST00000639004 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
FAM49B-230ENST00000639004 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.34
FAM49B-230ENST00000639004 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms