RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 FAM50AQ14320 339 aaKnown RBP14.72□□□□□ -0.05
SCARB2-214ENST00000638843 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
SCARB2-214ENST00000638843 DAPK1P53355 1430 aa14.7□□□□□ -0.06
SCARB2-214ENST00000638843 CHIC2Q9UKJ5 165 aa14.7□□□□□ -0.06
SCARB2-214ENST00000638843 CNTLNQ9NXG0 1405 aa14.7□□□□□ -0.06
SCARB2-214ENST00000638843 FER1L4A9Z1Z3 1794 aa14.69□□□□□ -0.06
SCARB2-214ENST00000638843 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
SCARB2-214ENST00000638843 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
SCARB2-214ENST00000638843 LMTK3Q96Q04 1460 aa14.68□□□□□ -0.06
SCARB2-214ENST00000638843 MAST1Q9Y2H9 1570 aa14.68□□□□□ -0.06
SCARB2-214ENST00000638843 HSPA2P54652 639 aa14.68□□□□□ -0.06
SCARB2-214ENST00000638843 ADGBQ8N7X0 1667 aa14.67□□□□□ -0.06
SCARB2-214ENST00000638843 KIF15Q9NS87 1388 aa14.67□□□□□ -0.06
SCARB2-214ENST00000638843 SHANK2Q9UPX8 1470 aa14.67□□□□□ -0.06
SCARB2-214ENST00000638843 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
SCARB2-214ENST00000638843 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
SCARB2-214ENST00000638843 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
SCARB2-214ENST00000638843 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
SCARB2-214ENST00000638843 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
SCARB2-214ENST00000638843 PTPRKQ15262 1439 aa14.62□□□□□ -0.07
SCARB2-214ENST00000638843 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
SCARB2-214ENST00000638843 FBXO31Q5XUX0 539 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-214ENST00000638843 ITGAEP38570 1179 aa14.6□□□□□ -0.07
SCARB2-214ENST00000638843 NPATQ14207 1427 aa14.59□□□□□ -0.07
SCARB2-214ENST00000638843 UHRF1BP1Q6BDS2 1440 aa14.59□□□□□ -0.07
SCARB2-214ENST00000638843 C3P01024 1663 aa14.59□□□□□ -0.07
SCARB2-214ENST00000638843 ERBINQ96RT1 1412 aa14.59□□□□□ -0.07
SCARB2-214ENST00000638843 ADGRL2O95490 1459 aa14.58□□□□□ -0.08
SCARB2-214ENST00000638843 CROCC2H7BZ55 1655 aa14.57□□□□□ -0.08
SCARB2-214ENST00000638843 CLTCQ00610 1675 aaKnown RBP14.57□□□□□ -0.08
SCARB2-214ENST00000638843 KDM5DQ9BY66 1539 aa14.57□□□□□ -0.08
SCARB2-214ENST00000638843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCARB2-214ENST00000638843 MROH2AA6NES4 1674 aa14.55□□□□□ -0.08
SCARB2-214ENST00000638843 RNF17Q9BXT8 1623 aaKnown RBP14.55□□□□□ -0.08
SCARB2-214ENST00000638843 ABCC3O15438 1527 aa14.54□□□□□ -0.08
SCARB2-214ENST00000638843 FAM135AQ9P2D6 1515 aa14.54□□□□□ -0.08
SCARB2-214ENST00000638843 RRBP1Q9P2E9 1410 aaKnown RBP14.54□□□□□ -0.08
SCARB2-214ENST00000638843 PZPP20742 1482 aa14.54□□□□□ -0.08
SCARB2-214ENST00000638843 MROH1Q8NDA8 1641 aa14.54□□□□□ -0.08
SCARB2-214ENST00000638843 EIF2AK4Q9P2K8 1649 aaKnown RBP14.54□□□□□ -0.08
SCARB2-214ENST00000638843 ANKRD50Q9ULJ7 1429 aa14.54□□□□□ -0.08
SCARB2-214ENST00000638843 ROCK1Q13464 1354 aa14.53□□□□□ -0.08
SCARB2-214ENST00000638843 PREX1Q8TCU6 1659 aa14.52□□□□□ -0.08
SCARB2-214ENST00000638843 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-214ENST00000638843 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
SCARB2-214ENST00000638843 TNRQ92752 1358 aa14.52□□□□□ -0.09
SCARB2-214ENST00000638843 POTEHQ6S545 545 aa14.5□□□□□ -0.09
SCARB2-214ENST00000638843 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
SCARB2-214ENST00000638843 KANK1Q14678 1352 aa14.5□□□□□ -0.09
SCARB2-214ENST00000638843 ARHGAP31Q2M1Z3 1444 aa14.47□□□□□ -0.09
SCARB2-214ENST00000638843 NCKAP5LQ9HCH0 1330 aa14.46□□□□□ -0.09
SCARB2-214ENST00000638843 A2ML1A8K2U0 1454 aa14.46□□□□□ -0.1
SCARB2-214ENST00000638843 DEPDC5O75140 1603 aa14.46□□□□□ -0.1
SCARB2-214ENST00000638843 DSG3P32926 999 aa14.45□□□□□ -0.1
SCARB2-214ENST00000638843 ERVK-7P63135 1459 aa14.45□□□□□ -0.1
SCARB2-214ENST00000638843 VWDEQ8N2E2 1590 aa14.45□□□□□ -0.1
SCARB2-214ENST00000638843 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
SCARB2-214ENST00000638843 CEP170BQ9Y4F5 1589 aaPredicted RBP14.45□□□□□ -0.1
SCARB2-214ENST00000638843 MYO3AQ8NEV4 1616 aa14.44□□□□□ -0.1
SCARB2-214ENST00000638843 LMTK2Q8IWU2 1503 aa14.44□□□□□ -0.1
SCARB2-214ENST00000638843 ZC3H13Q5T200 1668 aaKnown RBP14.43□□□□□ -0.1
SCARB2-214ENST00000638843 CAMSAP1Q5T5Y3 1602 aa14.43□□□□□ -0.1
SCARB2-214ENST00000638843 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
SCARB2-214ENST00000638843 NLRP1Q9C000 1473 aa14.43□□□□□ -0.1
SCARB2-214ENST00000638843 CAPN15O75808 1086 aa14.43□□□□□ -0.1
SCARB2-214ENST00000638843 THEMISQ8N1K5 641 aaPredicted RBP14.43□□□□□ -0.1
SCARB2-214ENST00000638843 NUP155O75694 1391 aa14.41□□□□□ -0.1
SCARB2-214ENST00000638843 PKD2Q13563 968 aa14.41□□□□□ -0.1
SCARB2-214ENST00000638843 CEP152O94986 1710 aa14.41□□□□□ -0.1
SCARB2-214ENST00000638843 NAIPQ13075 1403 aa14.41□□□□□ -0.1
SCARB2-214ENST00000638843 STRCQ7RTU9 1775 aa14.4□□□□□ -0.1
SCARB2-214ENST00000638843 PLA2R1Q13018 1463 aa14.4□□□□□ -0.1
SCARB2-214ENST00000638843 PTPRTO14522 1441 aa14.4□□□□□ -0.1
SCARB2-214ENST00000638843 IDI1Q13907 227 aa14.39□□□□□ -0.11
SCARB2-214ENST00000638843 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-214ENST00000638843 UGGT1Q9NYU2 1555 aa14.38□□□□□ -0.11
SCARB2-214ENST00000638843 NOS1P29475 1434 aa14.38□□□□□ -0.11
SCARB2-214ENST00000638843 EFCAB6Q5THR3 1501 aa14.38□□□□□ -0.11
SCARB2-214ENST00000638843 HFM1A2PYH4 1435 aa14.37□□□□□ -0.11
SCARB2-214ENST00000638843 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
SCARB2-214ENST00000638843 UNC13BO14795 1591 aa14.36□□□□□ -0.11
SCARB2-214ENST00000638843 RPRD2Q5VT52 1461 aaKnown RBP14.35□□□□□ -0.11
SCARB2-214ENST00000638843 SLC52A1Q9NWF4 448 aa14.34□□□□□ -0.11
SCARB2-214ENST00000638843 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-214ENST00000638843 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
SCARB2-214ENST00000638843 LTKP29376 864 aa14.33□□□□□ -0.12
SCARB2-214ENST00000638843 CERKQ8TCT0 537 aa14.33□□□□□ -0.12
SCARB2-214ENST00000638843 SYNMO15061 1565 aa14.32□□□□□ -0.12
SCARB2-214ENST00000638843 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-214ENST00000638843 TXNDC2Q86VQ3 553 aa14.31□□□□□ -0.12
SCARB2-214ENST00000638843 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
SCARB2-214ENST00000638843 TET3O43151 1660 aa14.3□□□□□ -0.12
SCARB2-214ENST00000638843 CFAP65Q6ZU64 1925 aaKnown RBP14.3□□□□□ -0.12
SCARB2-214ENST00000638843 TMEM2Q9UHN6 1383 aa14.3□□□□□ -0.12
SCARB2-214ENST00000638843 IQGAP3Q86VI3 1631 aa14.3□□□□□ -0.12
SCARB2-214ENST00000638843 NEURL4Q96JN8 1562 aa14.29□□□□□ -0.12
SCARB2-214ENST00000638843 NPHP4O75161 1426 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-214ENST00000638843 MED14O60244 1454 aa14.28□□□□□ -0.12
SCARB2-214ENST00000638843 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
SCARB2-214ENST00000638843 FBXO41Q8TF61 875 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms